Protein–RNA interactions for Protein: Q8N5U1

MS4A15, Membrane-spanning 4-domains subfamily A member 15, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A15Q8N5U1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
MS4A15Q8N5U1 AC068473.5-201ENST00000616428 2072 ntBASIC20.86■□□□□ 0.93
MS4A15Q8N5U1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MS4A15Q8N5U1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
MS4A15Q8N5U1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MS4A15Q8N5U1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MS4A15Q8N5U1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.86■□□□□ 0.93
MS4A15Q8N5U1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MS4A15Q8N5U1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A15Q8N5U1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A15Q8N5U1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A15Q8N5U1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.85■□□□□ 0.93
MS4A15Q8N5U1 LINC01971-201ENST00000617888 1048 ntBASIC20.85■□□□□ 0.93
MS4A15Q8N5U1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.85■□□□□ 0.93
MS4A15Q8N5U1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A15Q8N5U1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A15Q8N5U1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A15Q8N5U1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A15Q8N5U1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 DUX4L13-201ENST00000554103 1267 ntBASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 DUX4L15-201ENST00000611059 1267 ntBASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 DUX4L23-201ENST00000615195 1269 ntBASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 DUX4L24-201ENST00000617576 1269 ntBASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 DUX4L22-201ENST00000618238 1269 ntBASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 DUX4L20-201ENST00000619712 1269 ntBASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 DUX4L21-201ENST00000622058 1269 ntBASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 DUX4L10-201ENST00000622460 1267 ntBASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 DUX4L25-201ENST00000624915 1269 ntBASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A15Q8N5U1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A15Q8N5U1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A15Q8N5U1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A15Q8N5U1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
MS4A15Q8N5U1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A15Q8N5U1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A15Q8N5U1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A15Q8N5U1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
MS4A15Q8N5U1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.83■□□□□ 0.93
MS4A15Q8N5U1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.83■□□□□ 0.93
MS4A15Q8N5U1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.83■□□□□ 0.93
MS4A15Q8N5U1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.83■□□□□ 0.93
MS4A15Q8N5U1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
MS4A15Q8N5U1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
MS4A15Q8N5U1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A15Q8N5U1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A15Q8N5U1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.82■□□□□ 0.92
MS4A15Q8N5U1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A15Q8N5U1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A15Q8N5U1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.82■□□□□ 0.92
MS4A15Q8N5U1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A15Q8N5U1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.81■□□□□ 0.92
MS4A15Q8N5U1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.81■□□□□ 0.92
MS4A15Q8N5U1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A15Q8N5U1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.81■□□□□ 0.92
MS4A15Q8N5U1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A15Q8N5U1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A15Q8N5U1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A15Q8N5U1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.81■□□□□ 0.92
MS4A15Q8N5U1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A15Q8N5U1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A15Q8N5U1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A15Q8N5U1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A15Q8N5U1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A15Q8N5U1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.81■□□□□ 0.92
MS4A15Q8N5U1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
MS4A15Q8N5U1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A15Q8N5U1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
MS4A15Q8N5U1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A15Q8N5U1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A15Q8N5U1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A15Q8N5U1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A15Q8N5U1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.8■□□□□ 0.92
MS4A15Q8N5U1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.8■□□□□ 0.92
MS4A15Q8N5U1 DUSP8P5-201ENST00000422884 1815 ntBASIC20.8■□□□□ 0.92
MS4A15Q8N5U1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A15Q8N5U1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.8■□□□□ 0.92
MS4A15Q8N5U1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A15Q8N5U1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.79■□□□□ 0.92
MS4A15Q8N5U1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
MS4A15Q8N5U1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.79■□□□□ 0.92
MS4A15Q8N5U1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.79■□□□□ 0.92
MS4A15Q8N5U1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
MS4A15Q8N5U1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.79■□□□□ 0.92
MS4A15Q8N5U1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A15Q8N5U1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A15Q8N5U1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.79■□□□□ 0.92
MS4A15Q8N5U1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A15Q8N5U1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A15Q8N5U1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms