Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
SIX5Q8N196 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SIX5Q8N196 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SIX5Q8N196 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
SIX5Q8N196 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
SIX5Q8N196 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
SIX5Q8N196 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.45■■□□□ 1.5
SIX5Q8N196 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SIX5Q8N196 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SIX5Q8N196 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.45■■□□□ 1.5
SIX5Q8N196 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SIX5Q8N196 PBX2P1-201ENST00000493219 1291 ntBASIC24.45■■□□□ 1.5
SIX5Q8N196 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SIX5Q8N196 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.45■■□□□ 1.5
SIX5Q8N196 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
SIX5Q8N196 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.44■■□□□ 1.5
SIX5Q8N196 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SIX5Q8N196 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SIX5Q8N196 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
SIX5Q8N196 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.44■■□□□ 1.5
SIX5Q8N196 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SIX5Q8N196 AC142381.2-201ENST00000566120 298 ntBASIC24.44■■□□□ 1.5
SIX5Q8N196 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.44■■□□□ 1.5
SIX5Q8N196 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.44■■□□□ 1.5
SIX5Q8N196 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SIX5Q8N196 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.43■■□□□ 1.5
SIX5Q8N196 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SIX5Q8N196 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.43■■□□□ 1.5
SIX5Q8N196 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.43■■□□□ 1.5
SIX5Q8N196 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.42■■□□□ 1.5
SIX5Q8N196 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.42■■□□□ 1.5
SIX5Q8N196 AC106739.1-201ENST00000617035 715 ntBASIC24.42■■□□□ 1.5
SIX5Q8N196 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.42■■□□□ 1.5
SIX5Q8N196 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
SIX5Q8N196 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
SIX5Q8N196 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SIX5Q8N196 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SIX5Q8N196 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SIX5Q8N196 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SIX5Q8N196 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.41■■□□□ 1.5
SIX5Q8N196 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SIX5Q8N196 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SIX5Q8N196 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SIX5Q8N196 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SIX5Q8N196 AC026271.2-201ENST00000428091 497 ntBASIC24.4■■□□□ 1.5
SIX5Q8N196 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.4■■□□□ 1.5
SIX5Q8N196 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SIX5Q8N196 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.4■■□□□ 1.5
SIX5Q8N196 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.4■■□□□ 1.5
SIX5Q8N196 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.4■■□□□ 1.5
SIX5Q8N196 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.4■■□□□ 1.5
SIX5Q8N196 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SIX5Q8N196 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
SIX5Q8N196 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.39■■□□□ 1.49
SIX5Q8N196 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SIX5Q8N196 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
SIX5Q8N196 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SIX5Q8N196 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
SIX5Q8N196 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.38■■□□□ 1.49
SIX5Q8N196 AC011551.1-201ENST00000614101 683 ntBASIC24.38■■□□□ 1.49
SIX5Q8N196 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SIX5Q8N196 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
SIX5Q8N196 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.37■■□□□ 1.49
SIX5Q8N196 AC104564.3-201ENST00000582367 638 ntBASIC24.37■■□□□ 1.49
SIX5Q8N196 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.36■■□□□ 1.49
SIX5Q8N196 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SIX5Q8N196 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SIX5Q8N196 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.36■■□□□ 1.49
SIX5Q8N196 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SIX5Q8N196 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SIX5Q8N196 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.36■■□□□ 1.49
SIX5Q8N196 BX255925.1-201ENST00000566954 1854 ntBASIC24.36■■□□□ 1.49
SIX5Q8N196 AC135279.3-201ENST00000610945 1311 ntBASIC24.35■■□□□ 1.49
SIX5Q8N196 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.35■■□□□ 1.49
SIX5Q8N196 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.35■■□□□ 1.49
SIX5Q8N196 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.35■■□□□ 1.49
SIX5Q8N196 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.35■■□□□ 1.49
SIX5Q8N196 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SIX5Q8N196 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SIX5Q8N196 MIR5787-201ENST00000611784 55 ntBASIC24.34■■□□□ 1.49
SIX5Q8N196 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.34■■□□□ 1.49
SIX5Q8N196 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SIX5Q8N196 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.34■■□□□ 1.49
SIX5Q8N196 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
SIX5Q8N196 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SIX5Q8N196 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
SIX5Q8N196 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SIX5Q8N196 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
SIX5Q8N196 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.32■■□□□ 1.48
SIX5Q8N196 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.32■■□□□ 1.48
SIX5Q8N196 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.32■■□□□ 1.48
SIX5Q8N196 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
SIX5Q8N196 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SIX5Q8N196 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.31■■□□□ 1.48
SIX5Q8N196 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SIX5Q8N196 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.31■■□□□ 1.48
SIX5Q8N196 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
SIX5Q8N196 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SIX5Q8N196 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SIX5Q8N196 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms