Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.9□□□□□ -0.02
VPS13BQ7Z7G8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC14.9□□□□□ -0.02
VPS13BQ7Z7G8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
VPS13BQ7Z7G8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC14.9□□□□□ -0.02
VPS13BQ7Z7G8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS13BQ7Z7G8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
VPS13BQ7Z7G8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
VPS13BQ7Z7G8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC14.9□□□□□ -0.02
VPS13BQ7Z7G8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.9□□□□□ -0.02
VPS13BQ7Z7G8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS13BQ7Z7G8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13BQ7Z7G8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS13BQ7Z7G8 AC104564.3-201ENST00000582367 638 ntBASIC14.89□□□□□ -0.03
VPS13BQ7Z7G8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13BQ7Z7G8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13BQ7Z7G8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13BQ7Z7G8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC14.89□□□□□ -0.03
VPS13BQ7Z7G8 SUDS3P1-201ENST00000505831 966 ntBASIC14.89□□□□□ -0.03
VPS13BQ7Z7G8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13BQ7Z7G8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
VPS13BQ7Z7G8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13BQ7Z7G8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
VPS13BQ7Z7G8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
VPS13BQ7Z7G8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
VPS13BQ7Z7G8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
VPS13BQ7Z7G8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13BQ7Z7G8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC14.88□□□□□ -0.03
VPS13BQ7Z7G8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS13BQ7Z7G8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
VPS13BQ7Z7G8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS13BQ7Z7G8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS13BQ7Z7G8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VPS13BQ7Z7G8 MIR4281-201ENST00000580852 62 ntBASIC14.88□□□□□ -0.03
VPS13BQ7Z7G8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.87□□□□□ -0.03
VPS13BQ7Z7G8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC14.87□□□□□ -0.03
VPS13BQ7Z7G8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13BQ7Z7G8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13BQ7Z7G8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13BQ7Z7G8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VPS13BQ7Z7G8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13BQ7Z7G8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.87□□□□□ -0.03
VPS13BQ7Z7G8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC14.87□□□□□ -0.03
VPS13BQ7Z7G8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13BQ7Z7G8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13BQ7Z7G8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13BQ7Z7G8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13BQ7Z7G8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13BQ7Z7G8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.86□□□□□ -0.03
VPS13BQ7Z7G8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.86□□□□□ -0.03
VPS13BQ7Z7G8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.86□□□□□ -0.03
VPS13BQ7Z7G8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC14.86□□□□□ -0.03
VPS13BQ7Z7G8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13BQ7Z7G8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
VPS13BQ7Z7G8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC14.85□□□□□ -0.03
VPS13BQ7Z7G8 AL162430.1-201ENST00000480705 870 ntBASIC14.85□□□□□ -0.03
VPS13BQ7Z7G8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.85□□□□□ -0.03
VPS13BQ7Z7G8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
VPS13BQ7Z7G8 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.85□□□□□ -0.03
VPS13BQ7Z7G8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS13BQ7Z7G8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS13BQ7Z7G8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS13BQ7Z7G8 AC106739.1-201ENST00000617035 715 ntBASIC14.85□□□□□ -0.03
VPS13BQ7Z7G8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
VPS13BQ7Z7G8 MIR6821-201ENST00000617625 74 ntBASIC14.85□□□□□ -0.03
VPS13BQ7Z7G8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS13BQ7Z7G8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC14.84□□□□□ -0.03
VPS13BQ7Z7G8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.84□□□□□ -0.03
VPS13BQ7Z7G8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
VPS13BQ7Z7G8 MIR5787-201ENST00000611784 55 ntBASIC14.84□□□□□ -0.03
VPS13BQ7Z7G8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
VPS13BQ7Z7G8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS13BQ7Z7G8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13BQ7Z7G8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13BQ7Z7G8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
VPS13BQ7Z7G8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13BQ7Z7G8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC14.84□□□□□ -0.03
VPS13BQ7Z7G8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13BQ7Z7G8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
VPS13BQ7Z7G8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
VPS13BQ7Z7G8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13BQ7Z7G8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.84□□□□□ -0.03
VPS13BQ7Z7G8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13BQ7Z7G8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
VPS13BQ7Z7G8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC14.83□□□□□ -0.03
VPS13BQ7Z7G8 AC010997.5-201ENST00000609182 354 ntBASIC14.83□□□□□ -0.03
VPS13BQ7Z7G8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC14.83□□□□□ -0.03
VPS13BQ7Z7G8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS13BQ7Z7G8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13BQ7Z7G8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13BQ7Z7G8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC14.83□□□□□ -0.04
VPS13BQ7Z7G8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS13BQ7Z7G8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13BQ7Z7G8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC14.83□□□□□ -0.04
VPS13BQ7Z7G8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
VPS13BQ7Z7G8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13BQ7Z7G8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VPS13BQ7Z7G8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13BQ7Z7G8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13BQ7Z7G8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13BQ7Z7G8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms