Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.56■■□□□ 1.04
RNFT1Q5M7Z0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
RNFT1Q5M7Z0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNFT1Q5M7Z0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RNFT1Q5M7Z0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.55■■□□□ 1.04
RNFT1Q5M7Z0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNFT1Q5M7Z0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNFT1Q5M7Z0 AC137630.3-201ENST00000607245 391 ntBASIC21.55■■□□□ 1.04
RNFT1Q5M7Z0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.55■■□□□ 1.04
RNFT1Q5M7Z0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RNFT1Q5M7Z0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.55■■□□□ 1.04
RNFT1Q5M7Z0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNFT1Q5M7Z0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNFT1Q5M7Z0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNFT1Q5M7Z0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNFT1Q5M7Z0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNFT1Q5M7Z0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNFT1Q5M7Z0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.54■■□□□ 1.04
RNFT1Q5M7Z0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RNFT1Q5M7Z0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNFT1Q5M7Z0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNFT1Q5M7Z0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.54■■□□□ 1.04
RNFT1Q5M7Z0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.54■■□□□ 1.04
RNFT1Q5M7Z0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNFT1Q5M7Z0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNFT1Q5M7Z0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.53■■□□□ 1.04
RNFT1Q5M7Z0 UNC93B8-201ENST00000511903 705 ntBASIC21.53■■□□□ 1.04
RNFT1Q5M7Z0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.53■■□□□ 1.04
RNFT1Q5M7Z0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
RNFT1Q5M7Z0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.53■■□□□ 1.04
RNFT1Q5M7Z0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNFT1Q5M7Z0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.52■■□□□ 1.04
RNFT1Q5M7Z0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RNFT1Q5M7Z0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNFT1Q5M7Z0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RNFT1Q5M7Z0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNFT1Q5M7Z0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.52■■□□□ 1.04
RNFT1Q5M7Z0 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.52■■□□□ 1.04
RNFT1Q5M7Z0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.52■■□□□ 1.04
RNFT1Q5M7Z0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RNFT1Q5M7Z0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNFT1Q5M7Z0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNFT1Q5M7Z0 AC021242.3-201ENST00000607598 1377 ntBASIC21.51■■□□□ 1.03
RNFT1Q5M7Z0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNFT1Q5M7Z0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNFT1Q5M7Z0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNFT1Q5M7Z0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNFT1Q5M7Z0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.51■■□□□ 1.03
RNFT1Q5M7Z0 MIR4281-201ENST00000580852 62 ntBASIC21.51■■□□□ 1.03
RNFT1Q5M7Z0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RNFT1Q5M7Z0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNFT1Q5M7Z0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNFT1Q5M7Z0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.5■■□□□ 1.03
RNFT1Q5M7Z0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNFT1Q5M7Z0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNFT1Q5M7Z0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNFT1Q5M7Z0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNFT1Q5M7Z0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNFT1Q5M7Z0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNFT1Q5M7Z0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.49■■□□□ 1.03
RNFT1Q5M7Z0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.49■■□□□ 1.03
RNFT1Q5M7Z0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.49■■□□□ 1.03
RNFT1Q5M7Z0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNFT1Q5M7Z0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNFT1Q5M7Z0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNFT1Q5M7Z0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.48■■□□□ 1.03
RNFT1Q5M7Z0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.48■■□□□ 1.03
RNFT1Q5M7Z0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.48■■□□□ 1.03
RNFT1Q5M7Z0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RNFT1Q5M7Z0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNFT1Q5M7Z0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.48■■□□□ 1.03
RNFT1Q5M7Z0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RNFT1Q5M7Z0 ERN1-208ENST00000606895 2068 ntBASIC21.48■■□□□ 1.03
RNFT1Q5M7Z0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNFT1Q5M7Z0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNFT1Q5M7Z0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNFT1Q5M7Z0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNFT1Q5M7Z0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNFT1Q5M7Z0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.47■■□□□ 1.03
RNFT1Q5M7Z0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.47■■□□□ 1.03
RNFT1Q5M7Z0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNFT1Q5M7Z0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.47■■□□□ 1.03
RNFT1Q5M7Z0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.47■■□□□ 1.03
RNFT1Q5M7Z0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.47■■□□□ 1.03
RNFT1Q5M7Z0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RNFT1Q5M7Z0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RNFT1Q5M7Z0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNFT1Q5M7Z0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNFT1Q5M7Z0 TSPY9P-201ENST00000440215 945 ntBASIC21.46■■□□□ 1.03
RNFT1Q5M7Z0 TSPY11P-201ENST00000442607 1045 ntBASIC21.46■■□□□ 1.03
RNFT1Q5M7Z0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.46■■□□□ 1.03
RNFT1Q5M7Z0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.46■■□□□ 1.03
RNFT1Q5M7Z0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
RNFT1Q5M7Z0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RNFT1Q5M7Z0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNFT1Q5M7Z0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNFT1Q5M7Z0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.45■■□□□ 1.02
RNFT1Q5M7Z0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNFT1Q5M7Z0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNFT1Q5M7Z0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms