Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 MIR6724-1-201ENST00000616420 92 ntBASIC22.75■■□□□ 1.23
GABREP78334 MIR6724-2-201ENST00000616483 92 ntBASIC22.75■■□□□ 1.23
GABREP78334 MIR6724-4-201ENST00000617390 92 ntBASIC22.75■■□□□ 1.23
GABREP78334 AC110285.6-201ENST00000617652 491 ntBASIC22.75■■□□□ 1.23
GABREP78334 MIR6724-3-201ENST00000622482 92 ntBASIC22.75■■□□□ 1.23
GABREP78334 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
GABREP78334 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
GABREP78334 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
GABREP78334 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
GABREP78334 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.74■■□□□ 1.23
GABREP78334 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
GABREP78334 BX255925.1-201ENST00000566954 1854 ntBASIC22.74■■□□□ 1.23
GABREP78334 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
GABREP78334 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
GABREP78334 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.74■■□□□ 1.23
GABREP78334 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
GABREP78334 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
GABREP78334 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.73■■□□□ 1.23
GABREP78334 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
GABREP78334 AL356740.2-201ENST00000601559 647 ntBASIC22.73■■□□□ 1.23
GABREP78334 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.73■■□□□ 1.23
GABREP78334 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.72■■□□□ 1.23
GABREP78334 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
GABREP78334 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
GABREP78334 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
GABREP78334 AC096631.2-201ENST00000436136 790 ntBASIC22.72■■□□□ 1.23
GABREP78334 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
GABREP78334 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.72■■□□□ 1.23
GABREP78334 AC142086.6-201ENST00000621154 1765 ntBASIC22.71■■□□□ 1.23
GABREP78334 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
GABREP78334 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
GABREP78334 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.71■■□□□ 1.23
GABREP78334 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
GABREP78334 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.7■■□□□ 1.22
GABREP78334 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.7■■□□□ 1.22
GABREP78334 AC005837.3-201ENST00000612163 286 ntBASIC22.7■■□□□ 1.22
GABREP78334 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
GABREP78334 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
GABREP78334 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.7■■□□□ 1.22
GABREP78334 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
GABREP78334 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.7■■□□□ 1.22
GABREP78334 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
GABREP78334 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
GABREP78334 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
GABREP78334 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.69■■□□□ 1.22
GABREP78334 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.69■■□□□ 1.22
GABREP78334 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
GABREP78334 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
GABREP78334 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
GABREP78334 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
GABREP78334 DRD5P2-201ENST00000421395 2012 ntBASIC22.69■■□□□ 1.22
GABREP78334 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.69■■□□□ 1.22
GABREP78334 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
GABREP78334 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.68■■□□□ 1.22
GABREP78334 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
GABREP78334 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.68■■□□□ 1.22
GABREP78334 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
GABREP78334 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.67■■□□□ 1.22
GABREP78334 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
GABREP78334 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.67■■□□□ 1.22
GABREP78334 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
GABREP78334 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
GABREP78334 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
GABREP78334 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
GABREP78334 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.66■■□□□ 1.22
GABREP78334 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.66■■□□□ 1.22
GABREP78334 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.66■■□□□ 1.22
GABREP78334 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.66■■□□□ 1.22
GABREP78334 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.66■■□□□ 1.22
GABREP78334 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.66■■□□□ 1.22
GABREP78334 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.66■■□□□ 1.22
GABREP78334 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.66■■□□□ 1.22
GABREP78334 MIR4466-201ENST00000606121 54 ntBASIC22.66■■□□□ 1.22
GABREP78334 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
GABREP78334 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
GABREP78334 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.65■■□□□ 1.22
GABREP78334 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.65■■□□□ 1.22
GABREP78334 AC011551.1-201ENST00000614101 683 ntBASIC22.65■■□□□ 1.22
GABREP78334 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.65■■□□□ 1.22
GABREP78334 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.65■■□□□ 1.22
GABREP78334 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
GABREP78334 LINC01003-201ENST00000564834 1764 ntBASIC22.65■■□□□ 1.22
GABREP78334 AC142472.1-201ENST00000612013 1741 ntBASIC22.65■■□□□ 1.22
GABREP78334 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
GABREP78334 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
GABREP78334 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
GABREP78334 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.64■■□□□ 1.21
GABREP78334 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
GABREP78334 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
GABREP78334 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.63■■□□□ 1.21
GABREP78334 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.63■■□□□ 1.21
GABREP78334 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.63■■□□□ 1.21
GABREP78334 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
GABREP78334 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
GABREP78334 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
GABREP78334 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
GABREP78334 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
GABREP78334 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
GABREP78334 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.61■■□□□ 1.21
GABREP78334 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms