Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.24■□□□□ 0.99
GYPBP06028 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GYPBP06028 AP003733.4-201ENST00000623785 1697 ntBASIC21.24■□□□□ 0.99
GYPBP06028 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GYPBP06028 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.24■□□□□ 0.99
GYPBP06028 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GYPBP06028 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GYPBP06028 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.23■□□□□ 0.99
GYPBP06028 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GYPBP06028 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
GYPBP06028 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
GYPBP06028 AC025884.2-201ENST00000553429 711 ntBASIC21.23■□□□□ 0.99
GYPBP06028 MIR7108-201ENST00000614319 87 ntBASIC21.23■□□□□ 0.99
GYPBP06028 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GYPBP06028 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
GYPBP06028 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GYPBP06028 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
GYPBP06028 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
GYPBP06028 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GYPBP06028 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GYPBP06028 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GYPBP06028 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GYPBP06028 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GYPBP06028 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GYPBP06028 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.22■□□□□ 0.99
GYPBP06028 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GYPBP06028 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GYPBP06028 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GYPBP06028 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GYPBP06028 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GYPBP06028 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GYPBP06028 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.22■□□□□ 0.99
GYPBP06028 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GYPBP06028 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GYPBP06028 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
GYPBP06028 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
GYPBP06028 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GYPBP06028 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GYPBP06028 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.21■□□□□ 0.99
GYPBP06028 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.21■□□□□ 0.99
GYPBP06028 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
GYPBP06028 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GYPBP06028 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
GYPBP06028 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GYPBP06028 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.21■□□□□ 0.99
GYPBP06028 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GYPBP06028 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GYPBP06028 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GYPBP06028 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GYPBP06028 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GYPBP06028 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.2■□□□□ 0.98
GYPBP06028 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.2■□□□□ 0.98
GYPBP06028 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GYPBP06028 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.2■□□□□ 0.98
GYPBP06028 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GYPBP06028 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GYPBP06028 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
GYPBP06028 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GYPBP06028 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.19■□□□□ 0.98
GYPBP06028 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.19■□□□□ 0.98
GYPBP06028 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GYPBP06028 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.19■□□□□ 0.98
GYPBP06028 SMPD5-203ENST00000639008 1464 ntBASIC21.19■□□□□ 0.98
GYPBP06028 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
GYPBP06028 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
GYPBP06028 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GYPBP06028 MIR3960-201ENST00000583311 91 ntBASIC21.18■□□□□ 0.98
GYPBP06028 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GYPBP06028 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
GYPBP06028 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GYPBP06028 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GYPBP06028 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GYPBP06028 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GYPBP06028 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.17■□□□□ 0.98
GYPBP06028 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.17■□□□□ 0.98
GYPBP06028 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GYPBP06028 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GYPBP06028 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
GYPBP06028 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.16■□□□□ 0.98
GYPBP06028 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.16■□□□□ 0.98
GYPBP06028 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
GYPBP06028 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GYPBP06028 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GYPBP06028 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GYPBP06028 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GYPBP06028 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.15■□□□□ 0.98
GYPBP06028 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.15■□□□□ 0.98
GYPBP06028 AC092296.2-201ENST00000589470 999 ntBASIC21.15■□□□□ 0.98
GYPBP06028 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GYPBP06028 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GYPBP06028 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
GYPBP06028 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.14■□□□□ 0.98
GYPBP06028 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
GYPBP06028 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.14■□□□□ 0.97
GYPBP06028 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.14■□□□□ 0.97
GYPBP06028 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.14■□□□□ 0.97
GYPBP06028 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GYPBP06028 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GYPBP06028 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
GYPBP06028 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms