Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.83■■□□□ 1.41
RFPL1O75677 AP003733.4-201ENST00000623785 1697 ntBASIC23.83■■□□□ 1.4
RFPL1O75677 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RFPL1O75677 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RFPL1O75677 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
RFPL1O75677 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFPL1O75677 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
RFPL1O75677 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFPL1O75677 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
RFPL1O75677 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RFPL1O75677 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.82■■□□□ 1.4
RFPL1O75677 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFPL1O75677 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFPL1O75677 LINC01124-201ENST00000409786 2117 ntBASIC23.81■■□□□ 1.4
RFPL1O75677 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RFPL1O75677 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFPL1O75677 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFPL1O75677 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RFPL1O75677 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFPL1O75677 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RFPL1O75677 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFPL1O75677 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RFPL1O75677 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.8■■□□□ 1.4
RFPL1O75677 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RFPL1O75677 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RFPL1O75677 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
RFPL1O75677 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RFPL1O75677 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RFPL1O75677 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFPL1O75677 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.79■■□□□ 1.4
RFPL1O75677 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RFPL1O75677 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFPL1O75677 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
RFPL1O75677 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.78■■□□□ 1.4
RFPL1O75677 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFPL1O75677 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFPL1O75677 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFPL1O75677 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFPL1O75677 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
RFPL1O75677 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.77■■□□□ 1.4
RFPL1O75677 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RFPL1O75677 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFPL1O75677 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.77■■□□□ 1.4
RFPL1O75677 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
RFPL1O75677 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.77■■□□□ 1.4
RFPL1O75677 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
RFPL1O75677 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RFPL1O75677 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RFPL1O75677 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RFPL1O75677 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.76■■□□□ 1.39
RFPL1O75677 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RFPL1O75677 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RFPL1O75677 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RFPL1O75677 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
RFPL1O75677 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFPL1O75677 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFPL1O75677 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.74■■□□□ 1.39
RFPL1O75677 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFPL1O75677 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RFPL1O75677 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFPL1O75677 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RFPL1O75677 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFPL1O75677 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFPL1O75677 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
RFPL1O75677 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RFPL1O75677 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.73■■□□□ 1.39
RFPL1O75677 AC126177.7-201ENST00000547904 679 ntBASIC23.73■■□□□ 1.39
RFPL1O75677 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.73■■□□□ 1.39
RFPL1O75677 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFPL1O75677 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RFPL1O75677 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFPL1O75677 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RFPL1O75677 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFPL1O75677 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFPL1O75677 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RFPL1O75677 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.72■■□□□ 1.39
RFPL1O75677 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.72■■□□□ 1.39
RFPL1O75677 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RFPL1O75677 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.71■■□□□ 1.39
RFPL1O75677 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
RFPL1O75677 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RFPL1O75677 AC060814.1-201ENST00000554326 538 ntBASIC23.71■■□□□ 1.39
RFPL1O75677 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
RFPL1O75677 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RFPL1O75677 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.7■■□□□ 1.38
RFPL1O75677 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RFPL1O75677 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.7■■□□□ 1.38
RFPL1O75677 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RFPL1O75677 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RFPL1O75677 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RFPL1O75677 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RFPL1O75677 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.69■■□□□ 1.38
RFPL1O75677 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.69■■□□□ 1.38
RFPL1O75677 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.69■■□□□ 1.38
RFPL1O75677 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RFPL1O75677 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RFPL1O75677 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RFPL1O75677 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
RFPL1O75677 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RFPL1O75677 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms