Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PFDN1O60925 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PFDN1O60925 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PFDN1O60925 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PFDN1O60925 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PFDN1O60925 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PFDN1O60925 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
PFDN1O60925 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.33■■□□□ 1.01
PFDN1O60925 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PFDN1O60925 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
PFDN1O60925 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PFDN1O60925 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PFDN1O60925 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
PFDN1O60925 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.33■■□□□ 1
PFDN1O60925 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.33■■□□□ 1
PFDN1O60925 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
PFDN1O60925 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.32■■□□□ 1
PFDN1O60925 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PFDN1O60925 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.32■■□□□ 1
PFDN1O60925 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PFDN1O60925 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PFDN1O60925 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.32■■□□□ 1
PFDN1O60925 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PFDN1O60925 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PFDN1O60925 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PFDN1O60925 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PFDN1O60925 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PFDN1O60925 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.32■■□□□ 1
PFDN1O60925 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PFDN1O60925 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PFDN1O60925 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.31■■□□□ 1
PFDN1O60925 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.31■■□□□ 1
PFDN1O60925 AC007375.3-201ENST00000600936 2314 ntBASIC21.3■■□□□ 1
PFDN1O60925 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PFDN1O60925 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.3■■□□□ 1
PFDN1O60925 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PFDN1O60925 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PFDN1O60925 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
PFDN1O60925 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PFDN1O60925 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC21.3■■□□□ 1
PFDN1O60925 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.3■■□□□ 1
PFDN1O60925 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
PFDN1O60925 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PFDN1O60925 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PFDN1O60925 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PFDN1O60925 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.29■■□□□ 1
PFDN1O60925 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PFDN1O60925 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PFDN1O60925 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PFDN1O60925 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PFDN1O60925 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PFDN1O60925 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PFDN1O60925 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PFDN1O60925 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PFDN1O60925 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PFDN1O60925 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PFDN1O60925 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
PFDN1O60925 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.28■■□□□ 1
PFDN1O60925 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.28■■□□□ 1
PFDN1O60925 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PFDN1O60925 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.28■■□□□ 1
PFDN1O60925 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PFDN1O60925 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PFDN1O60925 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
PFDN1O60925 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.27■■□□□ 1
PFDN1O60925 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
PFDN1O60925 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.27■■□□□ 1
PFDN1O60925 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.27■■□□□ 1
PFDN1O60925 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.27■■□□□ 1
PFDN1O60925 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.27■□□□□ 0.99
PFDN1O60925 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PFDN1O60925 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PFDN1O60925 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PFDN1O60925 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PFDN1O60925 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PFDN1O60925 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.26■□□□□ 0.99
PFDN1O60925 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PFDN1O60925 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.26■□□□□ 0.99
PFDN1O60925 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PFDN1O60925 AC137767.1-201ENST00000602918 1920 ntBASIC21.25■□□□□ 0.99
PFDN1O60925 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PFDN1O60925 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PFDN1O60925 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PFDN1O60925 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PFDN1O60925 AC100797.4-201ENST00000631653 1827 ntBASIC21.25■□□□□ 0.99
PFDN1O60925 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
PFDN1O60925 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
PFDN1O60925 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.24■□□□□ 0.99
PFDN1O60925 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PFDN1O60925 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PFDN1O60925 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PFDN1O60925 AC096887.2-201ENST00000623443 1957 ntBASIC21.23■□□□□ 0.99
PFDN1O60925 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PFDN1O60925 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PFDN1O60925 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PFDN1O60925 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PFDN1O60925 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PFDN1O60925 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.22■□□□□ 0.99
PFDN1O60925 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PFDN1O60925 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms