Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SMPD2O60906 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMPD2O60906 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMPD2O60906 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMPD2O60906 AC145676.1-201ENST00000514988 2004 ntBASIC20.78■□□□□ 0.92
SMPD2O60906 AC239859.2-201ENST00000444165 318 ntBASIC20.78■□□□□ 0.92
SMPD2O60906 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.78■□□□□ 0.92
SMPD2O60906 AC019171.1-201ENST00000601251 1056 ntBASIC20.78■□□□□ 0.92
SMPD2O60906 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.78■□□□□ 0.92
SMPD2O60906 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.78■□□□□ 0.92
SMPD2O60906 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.78■□□□□ 0.92
SMPD2O60906 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMPD2O60906 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMPD2O60906 DUSP8P4-201ENST00000399538 1761 ntBASIC20.77■□□□□ 0.92
SMPD2O60906 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMPD2O60906 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMPD2O60906 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMPD2O60906 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMPD2O60906 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMPD2O60906 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMPD2O60906 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.76■□□□□ 0.91
SMPD2O60906 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.76■□□□□ 0.91
SMPD2O60906 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SMPD2O60906 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMPD2O60906 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.75■□□□□ 0.91
SMPD2O60906 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.75■□□□□ 0.91
SMPD2O60906 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMPD2O60906 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.75■□□□□ 0.91
SMPD2O60906 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SMPD2O60906 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SMPD2O60906 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.75■□□□□ 0.91
SMPD2O60906 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SMPD2O60906 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
SMPD2O60906 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.75■□□□□ 0.91
SMPD2O60906 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.75■□□□□ 0.91
SMPD2O60906 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMPD2O60906 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
SMPD2O60906 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.74■□□□□ 0.91
SMPD2O60906 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMPD2O60906 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMPD2O60906 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.74■□□□□ 0.91
SMPD2O60906 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMPD2O60906 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.73■□□□□ 0.91
SMPD2O60906 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMPD2O60906 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMPD2O60906 Z92544.1-202ENST00000571933 1220 ntBASIC20.73■□□□□ 0.91
SMPD2O60906 AC087393.1-201ENST00000582896 145 ntBASIC20.73■□□□□ 0.91
SMPD2O60906 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.73■□□□□ 0.91
SMPD2O60906 AC096887.2-201ENST00000623443 1957 ntBASIC20.73■□□□□ 0.91
SMPD2O60906 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
SMPD2O60906 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMPD2O60906 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMPD2O60906 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMPD2O60906 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.72■□□□□ 0.91
SMPD2O60906 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.72■□□□□ 0.91
SMPD2O60906 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.72■□□□□ 0.91
SMPD2O60906 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMPD2O60906 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMPD2O60906 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMPD2O60906 AC008406.3-201ENST00000620001 1374 ntBASIC20.72■□□□□ 0.91
SMPD2O60906 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMPD2O60906 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMPD2O60906 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.71■□□□□ 0.91
SMPD2O60906 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.71■□□□□ 0.91
SMPD2O60906 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMPD2O60906 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMPD2O60906 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SMPD2O60906 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.7■□□□□ 0.9
SMPD2O60906 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SMPD2O60906 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMPD2O60906 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMPD2O60906 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMPD2O60906 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMPD2O60906 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SMPD2O60906 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
SMPD2O60906 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMPD2O60906 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
SMPD2O60906 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMPD2O60906 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMPD2O60906 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.68■□□□□ 0.9
SMPD2O60906 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SMPD2O60906 RPS2P7-201ENST00000447334 885 ntBASIC20.68■□□□□ 0.9
SMPD2O60906 KRT125P-201ENST00000546827 989 ntBASIC20.68■□□□□ 0.9
SMPD2O60906 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMPD2O60906 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMPD2O60906 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMPD2O60906 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMPD2O60906 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMPD2O60906 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMPD2O60906 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMPD2O60906 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.67■□□□□ 0.9
SMPD2O60906 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMPD2O60906 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.67■□□□□ 0.9
SMPD2O60906 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SMPD2O60906 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMPD2O60906 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMPD2O60906 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.66■□□□□ 0.9
SMPD2O60906 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMPD2O60906 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
SMPD2O60906 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms