Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
MID1O15344 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
MID1O15344 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.92■■□□□ 1.42
MID1O15344 AL356441.2-201ENST00000443009 864 ntBASIC23.92■■□□□ 1.42
MID1O15344 KRT125P-201ENST00000546827 989 ntBASIC23.92■■□□□ 1.42
MID1O15344 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.92■■□□□ 1.42
MID1O15344 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.92■■□□□ 1.42
MID1O15344 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.92■■□□□ 1.42
MID1O15344 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
MID1O15344 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
MID1O15344 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
MID1O15344 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.91■■□□□ 1.42
MID1O15344 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
MID1O15344 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
MID1O15344 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.9■■□□□ 1.42
MID1O15344 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
MID1O15344 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MID1O15344 MIR4787-201ENST00000607364 84 ntBASIC23.9■■□□□ 1.42
MID1O15344 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.9■■□□□ 1.42
MID1O15344 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MID1O15344 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MID1O15344 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
MID1O15344 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
MID1O15344 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
MID1O15344 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
MID1O15344 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
MID1O15344 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
MID1O15344 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.89■■□□□ 1.41
MID1O15344 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.89■■□□□ 1.41
MID1O15344 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
MID1O15344 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
MID1O15344 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
MID1O15344 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
MID1O15344 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
MID1O15344 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
MID1O15344 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
MID1O15344 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MID1O15344 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.87■■□□□ 1.41
MID1O15344 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
MID1O15344 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MID1O15344 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MID1O15344 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
MID1O15344 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
MID1O15344 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.86■■□□□ 1.41
MID1O15344 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
MID1O15344 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
MID1O15344 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
MID1O15344 AC137630.3-201ENST00000607245 391 ntBASIC23.86■■□□□ 1.41
MID1O15344 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
MID1O15344 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
MID1O15344 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
MID1O15344 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
MID1O15344 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.85■■□□□ 1.41
MID1O15344 ERN1-208ENST00000606895 2068 ntBASIC23.85■■□□□ 1.41
MID1O15344 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MID1O15344 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.84■■□□□ 1.41
MID1O15344 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.84■■□□□ 1.41
MID1O15344 MIR4281-201ENST00000580852 62 ntBASIC23.84■■□□□ 1.41
MID1O15344 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.84■■□□□ 1.41
MID1O15344 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MID1O15344 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
MID1O15344 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
MID1O15344 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
MID1O15344 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
MID1O15344 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
MID1O15344 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.83■■□□□ 1.41
MID1O15344 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
MID1O15344 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
MID1O15344 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.83■■□□□ 1.41
MID1O15344 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.83■■□□□ 1.41
MID1O15344 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.83■■□□□ 1.41
MID1O15344 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
MID1O15344 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.82■■□□□ 1.4
MID1O15344 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
MID1O15344 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
MID1O15344 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.82■■□□□ 1.4
MID1O15344 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MID1O15344 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MID1O15344 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
MID1O15344 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.81■■□□□ 1.4
MID1O15344 UNC93B8-201ENST00000511903 705 ntBASIC23.81■■□□□ 1.4
MID1O15344 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.81■■□□□ 1.4
MID1O15344 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
MID1O15344 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.81■■□□□ 1.4
MID1O15344 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
MID1O15344 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MID1O15344 AC021242.3-201ENST00000607598 1377 ntBASIC23.8■■□□□ 1.4
MID1O15344 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
MID1O15344 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
MID1O15344 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MID1O15344 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MID1O15344 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MID1O15344 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.8■■□□□ 1.4
MID1O15344 AC096887.2-201ENST00000623443 1957 ntBASIC23.8■■□□□ 1.4
MID1O15344 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MID1O15344 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MID1O15344 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.79■■□□□ 1.4
MID1O15344 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.79■■□□□ 1.4
MID1O15344 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.79■■□□□ 1.4
MID1O15344 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms