Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IGKV3D-20A0A0C4DH25 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
IGKV3D-20A0A0C4DH25 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV3D-20A0A0C4DH25 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV3D-20A0A0C4DH25 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
IGKV3D-20A0A0C4DH25 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV3D-20A0A0C4DH25 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV3D-20A0A0C4DH25 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV3D-20A0A0C4DH25 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV3D-20A0A0C4DH25 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV3D-20A0A0C4DH25 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV3D-20A0A0C4DH25 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
IGKV3D-20A0A0C4DH25 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.55■□□□□ 0.4
IGKV3D-20A0A0C4DH25 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV3D-20A0A0C4DH25 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV3D-20A0A0C4DH25 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV3D-20A0A0C4DH25 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.55■□□□□ 0.4
IGKV3D-20A0A0C4DH25 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.55■□□□□ 0.4
IGKV3D-20A0A0C4DH25 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
IGKV3D-20A0A0C4DH25 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV3D-20A0A0C4DH25 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
IGKV3D-20A0A0C4DH25 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV3D-20A0A0C4DH25 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV3D-20A0A0C4DH25 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV3D-20A0A0C4DH25 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV3D-20A0A0C4DH25 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.54■□□□□ 0.4
IGKV3D-20A0A0C4DH25 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.54■□□□□ 0.4
IGKV3D-20A0A0C4DH25 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
IGKV3D-20A0A0C4DH25 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
IGKV3D-20A0A0C4DH25 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
IGKV3D-20A0A0C4DH25 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
IGKV3D-20A0A0C4DH25 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IGKV3D-20A0A0C4DH25 RPS2P35-201ENST00000443417 897 ntBASIC17.53■□□□□ 0.4
IGKV3D-20A0A0C4DH25 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IGKV3D-20A0A0C4DH25 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IGKV3D-20A0A0C4DH25 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
IGKV3D-20A0A0C4DH25 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IGKV3D-20A0A0C4DH25 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.52■□□□□ 0.4
IGKV3D-20A0A0C4DH25 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IGKV3D-20A0A0C4DH25 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IGKV3D-20A0A0C4DH25 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.52■□□□□ 0.4
IGKV3D-20A0A0C4DH25 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IGKV3D-20A0A0C4DH25 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
IGKV3D-20A0A0C4DH25 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
IGKV3D-20A0A0C4DH25 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.52■□□□□ 0.39
IGKV3D-20A0A0C4DH25 LINC00543-201ENST00000567234 1845 ntBASIC17.51■□□□□ 0.39
IGKV3D-20A0A0C4DH25 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IGKV3D-20A0A0C4DH25 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.51■□□□□ 0.39
IGKV3D-20A0A0C4DH25 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
IGKV3D-20A0A0C4DH25 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IGKV3D-20A0A0C4DH25 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
IGKV3D-20A0A0C4DH25 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
IGKV3D-20A0A0C4DH25 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IGKV3D-20A0A0C4DH25 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.51■□□□□ 0.39
IGKV3D-20A0A0C4DH25 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IGKV3D-20A0A0C4DH25 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.51■□□□□ 0.39
IGKV3D-20A0A0C4DH25 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
IGKV3D-20A0A0C4DH25 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
IGKV3D-20A0A0C4DH25 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IGKV3D-20A0A0C4DH25 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IGKV3D-20A0A0C4DH25 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.5■□□□□ 0.39
IGKV3D-20A0A0C4DH25 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
IGKV3D-20A0A0C4DH25 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IGKV3D-20A0A0C4DH25 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
IGKV3D-20A0A0C4DH25 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IGKV3D-20A0A0C4DH25 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IGKV3D-20A0A0C4DH25 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IGKV3D-20A0A0C4DH25 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
IGKV3D-20A0A0C4DH25 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
IGKV3D-20A0A0C4DH25 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IGKV3D-20A0A0C4DH25 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
IGKV3D-20A0A0C4DH25 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
IGKV3D-20A0A0C4DH25 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IGKV3D-20A0A0C4DH25 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IGKV3D-20A0A0C4DH25 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.49■□□□□ 0.39
IGKV3D-20A0A0C4DH25 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
IGKV3D-20A0A0C4DH25 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IGKV3D-20A0A0C4DH25 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IGKV3D-20A0A0C4DH25 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IGKV3D-20A0A0C4DH25 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IGKV3D-20A0A0C4DH25 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IGKV3D-20A0A0C4DH25 AC126177.7-201ENST00000547904 679 ntBASIC17.49■□□□□ 0.39
IGKV3D-20A0A0C4DH25 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
IGKV3D-20A0A0C4DH25 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.49■□□□□ 0.39
IGKV3D-20A0A0C4DH25 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IGKV3D-20A0A0C4DH25 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IGKV3D-20A0A0C4DH25 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IGKV3D-20A0A0C4DH25 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.48■□□□□ 0.39
IGKV3D-20A0A0C4DH25 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IGKV3D-20A0A0C4DH25 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
IGKV3D-20A0A0C4DH25 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.48■□□□□ 0.39
IGKV3D-20A0A0C4DH25 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IGKV3D-20A0A0C4DH25 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IGKV3D-20A0A0C4DH25 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IGKV3D-20A0A0C4DH25 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.48■□□□□ 0.39
IGKV3D-20A0A0C4DH25 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IGKV3D-20A0A0C4DH25 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
IGKV3D-20A0A0C4DH25 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
IGKV3D-20A0A0C4DH25 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IGKV3D-20A0A0C4DH25 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms