Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 AC010980.1-201ENST00000587192 1142 ntBASIC17.87■□□□□ 0.45
TRAV25A0A0B4J276 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV25A0A0B4J276 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV25A0A0B4J276 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV25A0A0B4J276 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV25A0A0B4J276 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRAV25A0A0B4J276 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV25A0A0B4J276 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV25A0A0B4J276 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRAV25A0A0B4J276 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV25A0A0B4J276 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
TRAV25A0A0B4J276 AL592295.1-201ENST00000400984 884 ntBASIC17.86■□□□□ 0.45
TRAV25A0A0B4J276 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV25A0A0B4J276 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV25A0A0B4J276 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV25A0A0B4J276 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV25A0A0B4J276 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV25A0A0B4J276 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV25A0A0B4J276 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV25A0A0B4J276 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV25A0A0B4J276 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV25A0A0B4J276 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV25A0A0B4J276 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
TRAV25A0A0B4J276 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV25A0A0B4J276 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.85■□□□□ 0.45
TRAV25A0A0B4J276 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV25A0A0B4J276 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV25A0A0B4J276 YBX1P4-201ENST00000392794 808 ntBASIC17.84■□□□□ 0.45
TRAV25A0A0B4J276 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV25A0A0B4J276 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV25A0A0B4J276 MIR4508-201ENST00000584178 70 ntBASIC17.84■□□□□ 0.45
TRAV25A0A0B4J276 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV25A0A0B4J276 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRAV25A0A0B4J276 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV25A0A0B4J276 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.83■□□□□ 0.45
TRAV25A0A0B4J276 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.83■□□□□ 0.44
TRAV25A0A0B4J276 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV25A0A0B4J276 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV25A0A0B4J276 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
TRAV25A0A0B4J276 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV25A0A0B4J276 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV25A0A0B4J276 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV25A0A0B4J276 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV25A0A0B4J276 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV25A0A0B4J276 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV25A0A0B4J276 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TRAV25A0A0B4J276 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV25A0A0B4J276 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV25A0A0B4J276 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV25A0A0B4J276 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV25A0A0B4J276 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.81■□□□□ 0.44
TRAV25A0A0B4J276 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
TRAV25A0A0B4J276 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV25A0A0B4J276 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV25A0A0B4J276 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV25A0A0B4J276 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV25A0A0B4J276 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
TRAV25A0A0B4J276 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV25A0A0B4J276 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
TRAV25A0A0B4J276 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV25A0A0B4J276 PVT1_1.1-201ENST00000615125 194 ntBASIC17.8■□□□□ 0.44
TRAV25A0A0B4J276 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV25A0A0B4J276 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV25A0A0B4J276 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV25A0A0B4J276 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV25A0A0B4J276 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV25A0A0B4J276 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.79■□□□□ 0.44
TRAV25A0A0B4J276 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRAV25A0A0B4J276 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
TRAV25A0A0B4J276 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV25A0A0B4J276 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV25A0A0B4J276 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRAV25A0A0B4J276 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV25A0A0B4J276 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRAV25A0A0B4J276 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAV25A0A0B4J276 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV25A0A0B4J276 FOXO3B-201ENST00000395675 1928 ntBASIC17.78■□□□□ 0.44
TRAV25A0A0B4J276 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV25A0A0B4J276 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV25A0A0B4J276 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV25A0A0B4J276 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV25A0A0B4J276 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV25A0A0B4J276 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV25A0A0B4J276 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TRAV25A0A0B4J276 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV25A0A0B4J276 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
TRAV25A0A0B4J276 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV25A0A0B4J276 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV25A0A0B4J276 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV25A0A0B4J276 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRAV25A0A0B4J276 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRAV25A0A0B4J276 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV25A0A0B4J276 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV25A0A0B4J276 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV25A0A0B4J276 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV25A0A0B4J276 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
TRAV25A0A0B4J276 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV25A0A0B4J276 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRAV25A0A0B4J276 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV25A0A0B4J276 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms