Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 AL592309.1-201ENST00000443127 649 ntBASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 AC069335.1-201ENST00000489972 472 ntBASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 AC243562.1-201ENST00000560672 389 ntBASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA6Q9Y5G7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 HMGA1P7-201ENST00000406908 502 ntBASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 AC109635.5-201ENST00000533593 962 ntBASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 AL135744.1-201ENST00000565098 629 ntBASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA6Q9Y5G7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 AC007950.2-201ENST00000615045 2347 ntBASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 CNN2P2-201ENST00000443536 909 ntBASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 CNN2P3-201ENST00000450201 906 ntBASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 AC005498.2-205ENST00000593218 784 ntBASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 AL136317.3-201ENST00000618497 906 ntBASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms