Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 AC091167.2-201ENST00000579581 588 ntBASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 MIR4492-201ENST00000581627 80 ntBASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 AL591684.3-201ENST00000605187 298 ntBASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 PCGF3-213ENST00000620529 1899 ntBASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXRED1Q96CU9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 TPM4P1-201ENST00000436100 807 ntBASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXRED1Q96CU9 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms