Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.51■□□□□ 0.55
USP6NLQ92738 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.51■□□□□ 0.55
USP6NLQ92738 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.51■□□□□ 0.55
USP6NLQ92738 SNX29P1-201ENST00000548357 1007 ntBASIC18.51■□□□□ 0.55
USP6NLQ92738 RRP7BP-205ENST00000566851 833 ntBASIC18.51■□□□□ 0.55
USP6NLQ92738 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.51■□□□□ 0.55
USP6NLQ92738 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.51■□□□□ 0.55
USP6NLQ92738 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.51■□□□□ 0.55
USP6NLQ92738 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6NLQ92738 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
USP6NLQ92738 COX11-210ENST00000639671 696 ntBASIC18.51■□□□□ 0.55
USP6NLQ92738 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.51■□□□□ 0.55
USP6NLQ92738 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6NLQ92738 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.51■□□□□ 0.55
USP6NLQ92738 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
USP6NLQ92738 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6NLQ92738 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6NLQ92738 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6NLQ92738 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.51■□□□□ 0.55
USP6NLQ92738 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6NLQ92738 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6NLQ92738 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6NLQ92738 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
USP6NLQ92738 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
USP6NLQ92738 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
USP6NLQ92738 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP6NLQ92738 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
USP6NLQ92738 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
USP6NLQ92738 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.5■□□□□ 0.55
USP6NLQ92738 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 AC007389.4-201ENST00000454674 793 ntBASIC18.5■□□□□ 0.55
USP6NLQ92738 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.5■□□□□ 0.55
USP6NLQ92738 AL606495.2-201ENST00000605867 535 ntBASIC18.5■□□□□ 0.55
USP6NLQ92738 MIR6775-201ENST00000617557 69 ntBASIC18.5■□□□□ 0.55
USP6NLQ92738 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.5■□□□□ 0.55
USP6NLQ92738 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
USP6NLQ92738 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
USP6NLQ92738 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.5■□□□□ 0.55
USP6NLQ92738 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6NLQ92738 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
USP6NLQ92738 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
USP6NLQ92738 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
USP6NLQ92738 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.49■□□□□ 0.55
USP6NLQ92738 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
USP6NLQ92738 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
USP6NLQ92738 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
USP6NLQ92738 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 AP005482.1-201ENST00000563722 1273 ntBASIC18.49■□□□□ 0.55
USP6NLQ92738 AC020765.3-201ENST00000613051 740 ntBASIC18.49■□□□□ 0.55
USP6NLQ92738 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.49■□□□□ 0.55
USP6NLQ92738 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 CROCCP2-202ENST00000412962 2773 ntBASIC18.49■□□□□ 0.55
USP6NLQ92738 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
USP6NLQ92738 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.49■□□□□ 0.55
USP6NLQ92738 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6NLQ92738 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.49■□□□□ 0.55
USP6NLQ92738 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.49■□□□□ 0.55
USP6NLQ92738 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.49■□□□□ 0.55
USP6NLQ92738 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms