Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 TREML5P-201ENST00000421694 576 ntBASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 AC098859.1-201ENST00000502915 1238 ntBASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 RNA5SP410-201ENST00000516285 106 ntBASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 IGHV3-42-201ENST00000520410 361 ntBASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCN4BQ8IWT1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCN4BQ8IWT1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.33■□□□□ 0.37
SCN4BQ8IWT1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.33■□□□□ 0.37
SCN4BQ8IWT1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.33■□□□□ 0.37
SCN4BQ8IWT1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
SCN4BQ8IWT1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCN4BQ8IWT1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SCN4BQ8IWT1 PCGF3-213ENST00000620529 1899 ntBASIC17.33■□□□□ 0.37
SCN4BQ8IWT1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCN4BQ8IWT1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCN4BQ8IWT1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SCN4BQ8IWT1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCN4BQ8IWT1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.33■□□□□ 0.37
SCN4BQ8IWT1 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCN4BQ8IWT1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 FO538757.1-201ENST00000623083 1397 ntBASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 AC140878.1-201ENST00000565277 250 ntBASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 AL390955.2-201ENST00000603032 514 ntBASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 AC079328.2-201ENST00000561241 3354 ntBASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.33■□□□□ 0.36
SCN4BQ8IWT1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 AC055876.3-201ENST00000431496 288 ntBASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 AC138649.4-201ENST00000612222 287 ntBASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms