Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.87■□□□□ 0.29
CASC4Q6P4E1 AC087641.1-201ENST00000557561 1021 ntBASIC16.87■□□□□ 0.29
CASC4Q6P4E1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 KRT18P27-201ENST00000427733 1299 ntBASIC16.86■□□□□ 0.29
CASC4Q6P4E1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 UNC93B7-201ENST00000509439 705 ntBASIC16.86■□□□□ 0.29
CASC4Q6P4E1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 AC005412.3-201ENST00000580309 715 ntBASIC16.86■□□□□ 0.29
CASC4Q6P4E1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 AC129492.6-201ENST00000611383 1305 ntBASIC16.86■□□□□ 0.29
CASC4Q6P4E1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASC4Q6P4E1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 PCGF3-213ENST00000620529 1899 ntBASIC16.85■□□□□ 0.29
CASC4Q6P4E1 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 AC073621.1-201ENST00000392730 636 ntBASIC16.85■□□□□ 0.29
CASC4Q6P4E1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 FAM197Y8-203ENST00000450145 560 ntBASIC16.85■□□□□ 0.29
CASC4Q6P4E1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 AL596087.1-201ENST00000400979 1969 ntBASIC16.85■□□□□ 0.29
CASC4Q6P4E1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CASC4Q6P4E1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 GPAA1P2-202ENST00000606848 1787 ntBASIC16.84■□□□□ 0.29
CASC4Q6P4E1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms