Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 TUBB3P1-201ENST00000405796 1332 ntBASIC18.84■□□□□ 0.61
CHMP4BP1P59074 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 AC067863.1-201ENST00000494933 530 ntBASIC18.84■□□□□ 0.61
CHMP4BP1P59074 IGHV3-42-201ENST00000520410 361 ntBASIC18.84■□□□□ 0.61
CHMP4BP1P59074 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 AL009183.1-201ENST00000603760 355 ntBASIC18.84■□□□□ 0.61
CHMP4BP1P59074 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP4BP1P59074 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.83■□□□□ 0.61
CHMP4BP1P59074 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP4BP1P59074 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CHMP4BP1P59074 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP4BP1P59074 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.83■□□□□ 0.61
CHMP4BP1P59074 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.83■□□□□ 0.61
CHMP4BP1P59074 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CHMP4BP1P59074 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
CHMP4BP1P59074 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP4BP1P59074 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP4BP1P59074 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
CHMP4BP1P59074 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP4BP1P59074 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 COX20P2-201ENST00000452636 358 ntBASIC18.83■□□□□ 0.6
CHMP4BP1P59074 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 AC138761.1-201ENST00000584393 385 ntBASIC18.83■□□□□ 0.6
CHMP4BP1P59074 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CHMP4BP1P59074 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 AKAP8P1-201ENST00000434743 1349 ntBASIC18.82■□□□□ 0.6
CHMP4BP1P59074 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms