Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CXCL5P42830 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CXCL5P42830 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CXCL5P42830 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CXCL5P42830 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
CXCL5P42830 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.18□□□□□ -0.62
CXCL5P42830 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC11.18□□□□□ -0.62
CXCL5P42830 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
CXCL5P42830 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CXCL5P42830 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC11.18□□□□□ -0.62
CXCL5P42830 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
CXCL5P42830 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CXCL5P42830 AL122018.1-201ENST00000446607 2310 ntBASIC11.18□□□□□ -0.62
CXCL5P42830 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC11.18□□□□□ -0.62
CXCL5P42830 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
CXCL5P42830 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
CXCL5P42830 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CXCL5P42830 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CXCL5P42830 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC11.18□□□□□ -0.62
CXCL5P42830 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 HNRNPRP1-201ENST00000453465 1695 ntBASIC11.17□□□□□ -0.62
CXCL5P42830 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.17□□□□□ -0.62
CXCL5P42830 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 AMT-233ENST00000636522 1620 ntTSL 2 BASIC11.17□□□□□ -0.62
CXCL5P42830 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
CXCL5P42830 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC11.17□□□□□ -0.62
CXCL5P42830 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
CXCL5P42830 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 AC092364.2-201ENST00000596710 2692 ntBASIC11.17□□□□□ -0.62
CXCL5P42830 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
CXCL5P42830 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC11.17□□□□□ -0.62
CXCL5P42830 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC11.17□□□□□ -0.62
CXCL5P42830 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
CXCL5P42830 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
CXCL5P42830 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC11.17□□□□□ -0.62
CXCL5P42830 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC11.17□□□□□ -0.62
CXCL5P42830 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
CXCL5P42830 AL596275.1-201ENST00000423464 877 ntBASIC11.17□□□□□ -0.62
CXCL5P42830 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC11.17□□□□□ -0.62
CXCL5P42830 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
CXCL5P42830 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 AC022616.7-201ENST00000525383 220 ntBASIC11.17□□□□□ -0.62
CXCL5P42830 AL136038.3-201ENST00000561909 1096 ntBASIC11.17□□□□□ -0.62
CXCL5P42830 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
CXCL5P42830 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
CXCL5P42830 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 AC006011.2-201ENST00000621313 1158 ntBASIC11.17□□□□□ -0.62
CXCL5P42830 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC11.17□□□□□ -0.62
CXCL5P42830 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC11.17□□□□□ -0.62
CXCL5P42830 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC11.17□□□□□ -0.62
CXCL5P42830 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
CXCL5P42830 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC11.17□□□□□ -0.62
CXCL5P42830 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 GRK6P1-201ENST00000400595 1711 ntBASIC11.17□□□□□ -0.62
CXCL5P42830 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC11.17□□□□□ -0.62
CXCL5P42830 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CXCL5P42830 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC11.17□□□□□ -0.62
CXCL5P42830 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 INTS4P1-201ENST00000438455 1935 ntBASIC11.17□□□□□ -0.62
CXCL5P42830 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CXCL5P42830 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
CXCL5P42830 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.17□□□□□ -0.62
CXCL5P42830 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CXCL5P42830 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11.17□□□□□ -0.62
CXCL5P42830 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
CXCL5P42830 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms