Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
KRT9P35527 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT9P35527 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KRT9P35527 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
KRT9P35527 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
KRT9P35527 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
KRT9P35527 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KRT9P35527 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT9P35527 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.07■□□□□ 0.48
KRT9P35527 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KRT9P35527 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.07■□□□□ 0.48
KRT9P35527 KRT18P27-201ENST00000427733 1299 ntBASIC18.07■□□□□ 0.48
KRT9P35527 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.07■□□□□ 0.48
KRT9P35527 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.07■□□□□ 0.48
KRT9P35527 HNRNPDP1-201ENST00000439535 754 ntBASIC18.07■□□□□ 0.48
KRT9P35527 AC018712.1-201ENST00000455767 687 ntBASIC18.07■□□□□ 0.48
KRT9P35527 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.07■□□□□ 0.48
KRT9P35527 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.07■□□□□ 0.48
KRT9P35527 AC136632.2-201ENST00000512891 861 ntBASIC18.07■□□□□ 0.48
KRT9P35527 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.07■□□□□ 0.48
KRT9P35527 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.07■□□□□ 0.48
KRT9P35527 AL031008.1-201ENST00000619963 541 ntBASIC18.07■□□□□ 0.48
KRT9P35527 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.07■□□□□ 0.48
KRT9P35527 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.07■□□□□ 0.48
KRT9P35527 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.07■□□□□ 0.48
KRT9P35527 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT9P35527 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KRT9P35527 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.07■□□□□ 0.48
KRT9P35527 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT9P35527 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KRT9P35527 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.07■□□□□ 0.48
KRT9P35527 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.07■□□□□ 0.48
KRT9P35527 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
KRT9P35527 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT9P35527 GPAA1P2-202ENST00000606848 1787 ntBASIC18.07■□□□□ 0.48
KRT9P35527 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT9P35527 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KRT9P35527 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.06■□□□□ 0.48
KRT9P35527 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.06■□□□□ 0.48
KRT9P35527 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
KRT9P35527 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.06■□□□□ 0.48
KRT9P35527 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KRT9P35527 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.06■□□□□ 0.48
KRT9P35527 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
KRT9P35527 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.06■□□□□ 0.48
KRT9P35527 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
KRT9P35527 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.06■□□□□ 0.48
KRT9P35527 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.06■□□□□ 0.48
KRT9P35527 AC073621.1-201ENST00000392730 636 ntBASIC18.06■□□□□ 0.48
KRT9P35527 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.06■□□□□ 0.48
KRT9P35527 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.06■□□□□ 0.48
KRT9P35527 RPS15P9-201ENST00000494093 319 ntBASIC18.06■□□□□ 0.48
KRT9P35527 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 AC105339.3-201ENST00000560043 636 ntBASIC18.06■□□□□ 0.48
KRT9P35527 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
KRT9P35527 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.06■□□□□ 0.48
KRT9P35527 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.06■□□□□ 0.48
KRT9P35527 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
KRT9P35527 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.06■□□□□ 0.48
KRT9P35527 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KRT9P35527 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT9P35527 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KRT9P35527 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KRT9P35527 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT9P35527 AC092384.3-202ENST00000564646 2873 ntBASIC18.05■□□□□ 0.48
KRT9P35527 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
KRT9P35527 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.05■□□□□ 0.48
KRT9P35527 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.05■□□□□ 0.48
KRT9P35527 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
KRT9P35527 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT9P35527 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT9P35527 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.05■□□□□ 0.48
KRT9P35527 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.05■□□□□ 0.48
KRT9P35527 AC091167.2-201ENST00000579581 588 ntBASIC18.05■□□□□ 0.48
KRT9P35527 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.05■□□□□ 0.48
KRT9P35527 GGTLC5P-201ENST00000617623 998 ntBASIC18.05■□□□□ 0.48
KRT9P35527 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.05■□□□□ 0.48
KRT9P35527 AC148477.8-201ENST00000624298 468 ntBASIC18.05■□□□□ 0.48
KRT9P35527 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
KRT9P35527 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT9P35527 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT9P35527 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms