Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 SLC22A20-204ENST00000530038 1673 ntBASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 MRPL3P1-201ENST00000400109 1033 ntBASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 AC104692.2-201ENST00000603054 253 ntBASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 AC116407.3-201ENST00000623905 1129 ntBASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 KRT8P39-201ENST00000396270 1433 ntBASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 CRYGEP-201ENST00000412192 528 ntBASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 AC079776.4-201ENST00000511039 504 ntBASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 MIR4492-201ENST00000581627 80 ntBASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms