Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 AL671277.1-201ENST00000429656 993 ntBASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 AP006288.1-201ENST00000446065 395 ntBASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 AP002490.2-201ENST00000524791 560 ntBASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 AL139011.1-202ENST00000642063 584 ntBASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CNOT6Q9ULM6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 AL355306.1-201ENST00000415580 579 ntBASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 AC105339.1-204ENST00000636249 355 ntBASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.53■□□□□ 0.24
CNOT6Q9ULM6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT6Q9ULM6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CNOT6Q9ULM6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT6Q9ULM6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.52■□□□□ 0.24
CNOT6Q9ULM6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.52■□□□□ 0.24
CNOT6Q9ULM6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.52■□□□□ 0.24
CNOT6Q9ULM6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT6Q9ULM6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT6Q9ULM6 CYP2T1P-202ENST00000641596 2535 ntBASIC16.52■□□□□ 0.24
CNOT6Q9ULM6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT6Q9ULM6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT6Q9ULM6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT6Q9ULM6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT6Q9ULM6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT6Q9ULM6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms