Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 AL139424.1-201ENST00000607572 797 ntBASIC15.91■□□□□ 0.14
VPS33AQ96AX1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 AL358472.4-201ENST00000633140 710 ntBASIC15.91■□□□□ 0.14
VPS33AQ96AX1 AP000550.4-202ENST00000639755 178 ntBASIC15.91■□□□□ 0.14
VPS33AQ96AX1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 AC067930.6-201ENST00000623257 4947 ntBASIC15.91■□□□□ 0.14
VPS33AQ96AX1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 PRAL-201ENST00000624952 3286 ntBASIC15.9■□□□□ 0.14
VPS33AQ96AX1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 AC023824.1-201ENST00000562945 2975 ntBASIC15.9■□□□□ 0.14
VPS33AQ96AX1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.9■□□□□ 0.14
VPS33AQ96AX1 AC069148.1-201ENST00000608741 768 ntBASIC15.9■□□□□ 0.14
VPS33AQ96AX1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.9■□□□□ 0.14
VPS33AQ96AX1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.14
VPS33AQ96AX1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 FAM210CP-201ENST00000445714 574 ntBASIC15.89■□□□□ 0.13
VPS33AQ96AX1 KRT16P4-201ENST00000453883 522 ntBASIC15.89■□□□□ 0.13
VPS33AQ96AX1 AC087163.2-201ENST00000457299 853 ntBASIC15.89■□□□□ 0.13
VPS33AQ96AX1 AC106795.1-205ENST00000512851 1056 ntBASIC15.89■□□□□ 0.13
VPS33AQ96AX1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 REXO1L3P-201ENST00000622202 1288 ntBASIC15.89■□□□□ 0.13
VPS33AQ96AX1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms