Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 TNRC18P2-201ENST00000417666 2714 ntBASIC14.68□□□□□ -0.06
RFT1Q96AA3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 FAM45BP-202ENST00000592932 1624 ntBASIC14.68□□□□□ -0.06
RFT1Q96AA3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 AC010491.1-201ENST00000563101 2797 ntBASIC14.68□□□□□ -0.06
RFT1Q96AA3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 PMPCAP1-201ENST00000508114 1576 ntBASIC14.67□□□□□ -0.06
RFT1Q96AA3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RFT1Q96AA3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms