Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 AC007967.4-201ENST00000614700 386 ntBASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 SPDYE12P-201ENST00000618416 771 ntBASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 AC100757.3-201ENST00000622361 1406 ntBASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 AC092068.3-201ENST00000587894 2016 ntBASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 SNX33P1-201ENST00000592116 1762 ntBASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 AC073439.1-201ENST00000624121 1774 ntBASIC17.28■□□□□ 0.36
SHKBP1Q8TBC3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 HLA-H-201ENST00000383620 1096 ntBASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 MRPS18AP1-201ENST00000414458 589 ntBASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 TSSK5P-201ENST00000423978 907 ntBASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 AL590560.3-201ENST00000623350 461 ntBASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.27■□□□□ 0.36
SHKBP1Q8TBC3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SHKBP1Q8TBC3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHKBP1Q8TBC3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.27■□□□□ 0.35
SHKBP1Q8TBC3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHKBP1Q8TBC3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHKBP1Q8TBC3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SHKBP1Q8TBC3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SHKBP1Q8TBC3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.27■□□□□ 0.35
SHKBP1Q8TBC3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SHKBP1Q8TBC3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHKBP1Q8TBC3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SHKBP1Q8TBC3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SHKBP1Q8TBC3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SHKBP1Q8TBC3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SHKBP1Q8TBC3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms