Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 IMP3P2-201ENST00000489760 475 ntBASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 AC023310.1-201ENST00000554836 735 ntBASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 MIR4741-201ENST00000579822 90 ntBASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 ACR-203ENST00000529621 708 ntTSL 5 BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 AC244452.3-201ENST00000636814 210 ntBASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL22A1Q8NFW1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL22A1Q8NFW1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL22A1Q8NFW1 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC21.5■■□□□ 1.03
COL22A1Q8NFW1 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL22A1Q8NFW1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL22A1Q8NFW1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL22A1Q8NFW1 DEF8-202ENST00000418391 852 ntTSL 2 BASIC21.5■■□□□ 1.03
COL22A1Q8NFW1 PTPA-217ENST00000434095 870 ntTSL 2 BASIC21.5■■□□□ 1.03
COL22A1Q8NFW1 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL22A1Q8NFW1 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC21.5■■□□□ 1.03
COL22A1Q8NFW1 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC21.5■■□□□ 1.03
COL22A1Q8NFW1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL22A1Q8NFW1 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL22A1Q8NFW1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL22A1Q8NFW1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL22A1Q8NFW1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL22A1Q8NFW1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL22A1Q8NFW1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 AC091046.1-201ENST00000331871 207 ntBASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 AC004987.2-201ENST00000395959 1148 ntBASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 USP40-206ENST00000443711 628 ntTSL 2 BASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 HSPB1P2-201ENST00000448722 546 ntBASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 AL590640.2-201ENST00000457038 527 ntBASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 AHCYP2-201ENST00000430630 1300 ntBASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL22A1Q8NFW1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 HNRNPA1P32-201ENST00000396326 963 ntBASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL22A1Q8NFW1 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL22A1Q8NFW1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL22A1Q8NFW1 IGF1-203ENST00000392904 761 ntTSL 5 BASIC21.47■■□□□ 1.03
COL22A1Q8NFW1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL22A1Q8NFW1 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC21.47■■□□□ 1.03
COL22A1Q8NFW1 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms