Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CPEB3Q8NE35 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.46□□□□□ -0.1
CPEB3Q8NE35 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.46□□□□□ -0.1
CPEB3Q8NE35 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
CPEB3Q8NE35 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
CPEB3Q8NE35 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.46□□□□□ -0.1
CPEB3Q8NE35 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CPEB3Q8NE35 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
CPEB3Q8NE35 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 AC002347.1-201ENST00000569543 541 ntBASIC14.45□□□□□ -0.1
CPEB3Q8NE35 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 AC092364.2-201ENST00000596710 2692 ntBASIC14.45□□□□□ -0.1
CPEB3Q8NE35 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CPEB3Q8NE35 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 PCDH8P1-201ENST00000428983 2773 ntBASIC14.44□□□□□ -0.1
CPEB3Q8NE35 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 MCCD1P2-201ENST00000423228 335 ntBASIC14.44□□□□□ -0.1
CPEB3Q8NE35 AC004832.2-201ENST00000426397 482 ntBASIC14.44□□□□□ -0.1
CPEB3Q8NE35 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 DNAJB3-201ENST00000446806 729 ntBASIC14.44□□□□□ -0.1
CPEB3Q8NE35 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 PCGF3-213ENST00000620529 1899 ntBASIC14.44□□□□□ -0.1
CPEB3Q8NE35 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CPEB3Q8NE35 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms