Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NIPAL3Q6P499 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.06■□□□□ 0
NIPAL3Q6P499 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.06■□□□□ 0
NIPAL3Q6P499 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.06■□□□□ 0
NIPAL3Q6P499 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NIPAL3Q6P499 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
NIPAL3Q6P499 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.06■□□□□ 0
NIPAL3Q6P499 AC120114.3-201ENST00000611923 658 ntBASIC15.06■□□□□ 0
NIPAL3Q6P499 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.06■□□□□ 0
NIPAL3Q6P499 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.06■□□□□ 0
NIPAL3Q6P499 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.06■□□□□ 0
NIPAL3Q6P499 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
NIPAL3Q6P499 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.06■□□□□ 0
NIPAL3Q6P499 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.06■□□□□ 0
NIPAL3Q6P499 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NIPAL3Q6P499 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NIPAL3Q6P499 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
NIPAL3Q6P499 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
NIPAL3Q6P499 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.05■□□□□ 0
NIPAL3Q6P499 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.05■□□□□ 0
NIPAL3Q6P499 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
NIPAL3Q6P499 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.05■□□□□ -0
NIPAL3Q6P499 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.05■□□□□ -0
NIPAL3Q6P499 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.05■□□□□ -0
NIPAL3Q6P499 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
NIPAL3Q6P499 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
NIPAL3Q6P499 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.05■□□□□ -0
NIPAL3Q6P499 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
NIPAL3Q6P499 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.05■□□□□ -0
NIPAL3Q6P499 AC009947.1-201ENST00000444350 727 ntBASIC15.05■□□□□ -0
NIPAL3Q6P499 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
NIPAL3Q6P499 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NIPAL3Q6P499 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
NIPAL3Q6P499 Z83851.2-201ENST00000609564 659 ntBASIC15.05■□□□□ -0
NIPAL3Q6P499 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 AC104109.2-201ENST00000602919 1418 ntBASIC15.05■□□□□ -0
NIPAL3Q6P499 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
NIPAL3Q6P499 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
NIPAL3Q6P499 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.05■□□□□ -0
NIPAL3Q6P499 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.05■□□□□ -0
NIPAL3Q6P499 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.05■□□□□ -0
NIPAL3Q6P499 SNX33P1-201ENST00000592116 1762 ntBASIC15.05■□□□□ -0
NIPAL3Q6P499 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
NIPAL3Q6P499 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.05■□□□□ -0
NIPAL3Q6P499 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.05■□□□□ -0
NIPAL3Q6P499 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 AL671710.1-201ENST00000610245 2349 ntBASIC15.05■□□□□ -0
NIPAL3Q6P499 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.05■□□□□ -0
NIPAL3Q6P499 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NIPAL3Q6P499 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NIPAL3Q6P499 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NIPAL3Q6P499 AL596257.1-201ENST00000641463 2694 ntBASIC15.04■□□□□ -0
NIPAL3Q6P499 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.04■□□□□ -0
NIPAL3Q6P499 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.04■□□□□ -0
NIPAL3Q6P499 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NIPAL3Q6P499 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.04■□□□□ -0
NIPAL3Q6P499 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.04■□□□□ -0
NIPAL3Q6P499 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NIPAL3Q6P499 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.04■□□□□ -0
NIPAL3Q6P499 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.04■□□□□ -0
NIPAL3Q6P499 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms