Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
UBA52P62987 UPF3AP3-201ENST00000420996 769 ntBASIC14.32□□□□□ -0.12
UBA52P62987 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.32□□□□□ -0.12
UBA52P62987 KRT18P3-201ENST00000451602 1288 ntBASIC14.32□□□□□ -0.12
UBA52P62987 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
UBA52P62987 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
UBA52P62987 RNA5SP415-201ENST00000517246 115 ntBASIC14.32□□□□□ -0.12
UBA52P62987 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.32□□□□□ -0.12
UBA52P62987 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.32□□□□□ -0.12
UBA52P62987 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.32□□□□□ -0.12
UBA52P62987 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.32□□□□□ -0.12
UBA52P62987 AC012640.2-201ENST00000561606 901 ntBASIC14.32□□□□□ -0.12
UBA52P62987 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 AC008735.5-201ENST00000623544 497 ntBASIC14.32□□□□□ -0.12
UBA52P62987 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.32□□□□□ -0.12
UBA52P62987 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.32□□□□□ -0.12
UBA52P62987 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
UBA52P62987 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.32□□□□□ -0.12
UBA52P62987 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.32□□□□□ -0.12
UBA52P62987 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
UBA52P62987 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
UBA52P62987 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBA52P62987 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UBA52P62987 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.31□□□□□ -0.12
UBA52P62987 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.31□□□□□ -0.12
UBA52P62987 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UBA52P62987 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.31□□□□□ -0.12
UBA52P62987 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.31□□□□□ -0.12
UBA52P62987 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.31□□□□□ -0.12
UBA52P62987 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.31□□□□□ -0.12
UBA52P62987 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.31□□□□□ -0.12
UBA52P62987 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.31□□□□□ -0.12
UBA52P62987 AC010327.4-202ENST00000591484 748 ntBASIC14.31□□□□□ -0.12
UBA52P62987 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.31□□□□□ -0.12
UBA52P62987 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
UBA52P62987 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 AC092364.2-201ENST00000596710 2692 ntBASIC14.31□□□□□ -0.12
UBA52P62987 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.31□□□□□ -0.12
UBA52P62987 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
UBA52P62987 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.31□□□□□ -0.12
UBA52P62987 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 TCAF2P1-201ENST00000291129 2421 ntBASIC14.31□□□□□ -0.12
UBA52P62987 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBA52P62987 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
UBA52P62987 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.31□□□□□ -0.12
UBA52P62987 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.31□□□□□ -0.12
UBA52P62987 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
UBA52P62987 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.3□□□□□ -0.12
UBA52P62987 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
UBA52P62987 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.3□□□□□ -0.12
UBA52P62987 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 AC006058.4-201ENST00000624016 1670 ntBASIC14.3□□□□□ -0.12
UBA52P62987 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
UBA52P62987 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.3□□□□□ -0.12
UBA52P62987 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
UBA52P62987 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms