Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.65□□□□□ -0.22
SNCAP37840 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.65□□□□□ -0.22
SNCAP37840 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.65□□□□□ -0.22
SNCAP37840 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.65□□□□□ -0.22
SNCAP37840 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 MINOS1P3-201ENST00000457048 203 ntBASIC13.65□□□□□ -0.22
SNCAP37840 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.65□□□□□ -0.22
SNCAP37840 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.65□□□□□ -0.22
SNCAP37840 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.65□□□□□ -0.22
SNCAP37840 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.65□□□□□ -0.22
SNCAP37840 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SNCAP37840 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.65□□□□□ -0.22
SNCAP37840 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.65□□□□□ -0.22
SNCAP37840 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.65□□□□□ -0.22
SNCAP37840 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SNCAP37840 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SNCAP37840 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.65□□□□□ -0.22
SNCAP37840 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SNCAP37840 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SNCAP37840 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.64□□□□□ -0.23
SNCAP37840 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.64□□□□□ -0.23
SNCAP37840 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.64□□□□□ -0.23
SNCAP37840 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.64□□□□□ -0.23
SNCAP37840 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.64□□□□□ -0.23
SNCAP37840 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.64□□□□□ -0.23
SNCAP37840 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SNCAP37840 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.64□□□□□ -0.23
SNCAP37840 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.64□□□□□ -0.23
SNCAP37840 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.64□□□□□ -0.23
SNCAP37840 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.64□□□□□ -0.23
SNCAP37840 CHCHD2P8-201ENST00000429873 447 ntBASIC13.64□□□□□ -0.23
SNCAP37840 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SNCAP37840 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.64□□□□□ -0.23
SNCAP37840 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SNCAP37840 AC073592.5-201ENST00000624854 528 ntBASIC13.64□□□□□ -0.23
SNCAP37840 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.64□□□□□ -0.23
SNCAP37840 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SNCAP37840 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SNCAP37840 AL603832.2-201ENST00000566195 2125 ntBASIC13.64□□□□□ -0.23
SNCAP37840 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.64□□□□□ -0.23
SNCAP37840 CICP13-201ENST00000422015 2789 ntBASIC13.64□□□□□ -0.23
SNCAP37840 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.64□□□□□ -0.23
SNCAP37840 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SNCAP37840 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SNCAP37840 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.64□□□□□ -0.23
SNCAP37840 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.64□□□□□ -0.23
SNCAP37840 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNCAP37840 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
SNCAP37840 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCAP37840 ME2P1-201ENST00000426028 1970 ntBASIC13.63□□□□□ -0.23
SNCAP37840 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SNCAP37840 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCAP37840 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.63□□□□□ -0.23
SNCAP37840 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCAP37840 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.63□□□□□ -0.23
SNCAP37840 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCAP37840 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.63□□□□□ -0.23
SNCAP37840 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
SNCAP37840 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCAP37840 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCAP37840 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCAP37840 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNCAP37840 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.63□□□□□ -0.23
SNCAP37840 AL845331.1-201ENST00000424978 1190 ntBASIC13.63□□□□□ -0.23
SNCAP37840 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.63□□□□□ -0.23
SNCAP37840 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms