Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 AC103702.1-201ENST00000548801 2630 ntBASIC15.16■□□□□ 0.02
SHC1P29353 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.16■□□□□ 0.02
SHC1P29353 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
SHC1P29353 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
SHC1P29353 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SHC1P29353 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SHC1P29353 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.16■□□□□ 0.02
SHC1P29353 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.16■□□□□ 0.02
SHC1P29353 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.16■□□□□ 0.02
SHC1P29353 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SHC1P29353 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.16■□□□□ 0.02
SHC1P29353 AC091167.2-201ENST00000579581 588 ntBASIC15.16■□□□□ 0.02
SHC1P29353 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.16■□□□□ 0.02
SHC1P29353 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.16■□□□□ 0.02
SHC1P29353 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.16■□□□□ 0.02
SHC1P29353 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.16■□□□□ 0.02
SHC1P29353 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 AC131009.4-201ENST00000624048 1740 ntBASIC15.16■□□□□ 0.02
SHC1P29353 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 AL391256.1-201ENST00000443260 1855 ntBASIC15.16■□□□□ 0.02
SHC1P29353 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.16■□□□□ 0.02
SHC1P29353 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 PMS2P7-201ENST00000506558 1336 ntBASIC15.16■□□□□ 0.02
SHC1P29353 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SHC1P29353 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.16■□□□□ 0.02
SHC1P29353 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SHC1P29353 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SHC1P29353 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.15■□□□□ 0.02
SHC1P29353 AC105917.1-201ENST00000506637 2539 ntBASIC15.15■□□□□ 0.02
SHC1P29353 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
SHC1P29353 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.15■□□□□ 0.02
SHC1P29353 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.15■□□□□ 0.02
SHC1P29353 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SHC1P29353 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.15■□□□□ 0.02
SHC1P29353 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SHC1P29353 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
SHC1P29353 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.15■□□□□ 0.02
SHC1P29353 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
SHC1P29353 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.15■□□□□ 0.02
SHC1P29353 AC023141.13-201ENST00000604991 943 ntBASIC15.15■□□□□ 0.02
SHC1P29353 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.15■□□□□ 0.02
SHC1P29353 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.15■□□□□ 0.02
SHC1P29353 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.15■□□□□ 0.02
SHC1P29353 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
SHC1P29353 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SHC1P29353 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.15■□□□□ 0.02
SHC1P29353 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.15■□□□□ 0.02
SHC1P29353 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SHC1P29353 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.15■□□□□ 0.02
SHC1P29353 AL671710.1-201ENST00000610245 2349 ntBASIC15.15■□□□□ 0.02
SHC1P29353 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.15■□□□□ 0.02
SHC1P29353 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHC1P29353 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms