Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
COL8A2P25067 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.94□□□□□ -0.18
COL8A2P25067 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.94□□□□□ -0.18
COL8A2P25067 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
COL8A2P25067 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 AC005915.1-201ENST00000624912 2018 ntBASIC13.93□□□□□ -0.18
COL8A2P25067 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.93□□□□□ -0.18
COL8A2P25067 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 PCDHA14-201ENST00000506751 2298 ntBASIC13.93□□□□□ -0.18
COL8A2P25067 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
COL8A2P25067 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.93□□□□□ -0.18
COL8A2P25067 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
COL8A2P25067 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.93□□□□□ -0.18
COL8A2P25067 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
COL8A2P25067 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
COL8A2P25067 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
COL8A2P25067 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
COL8A2P25067 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.93□□□□□ -0.18
COL8A2P25067 CNN2P2-201ENST00000443536 909 ntBASIC13.93□□□□□ -0.18
COL8A2P25067 CNN2P3-201ENST00000450201 906 ntBASIC13.93□□□□□ -0.18
COL8A2P25067 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.93□□□□□ -0.18
COL8A2P25067 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.93□□□□□ -0.18
COL8A2P25067 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.93□□□□□ -0.18
COL8A2P25067 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.93□□□□□ -0.18
COL8A2P25067 AC015911.4-201ENST00000588022 1070 ntBASIC13.93□□□□□ -0.18
COL8A2P25067 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.93□□□□□ -0.18
COL8A2P25067 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.93□□□□□ -0.18
COL8A2P25067 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.93□□□□□ -0.18
COL8A2P25067 AL136317.3-201ENST00000618497 906 ntBASIC13.93□□□□□ -0.18
COL8A2P25067 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.93□□□□□ -0.18
COL8A2P25067 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.93□□□□□ -0.18
COL8A2P25067 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.93□□□□□ -0.18
COL8A2P25067 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL8A2P25067 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
COL8A2P25067 AL512652.2-201ENST00000625156 1716 ntBASIC13.93□□□□□ -0.18
COL8A2P25067 AC105020.1-201ENST00000435356 2205 ntBASIC13.92□□□□□ -0.18
COL8A2P25067 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
COL8A2P25067 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
COL8A2P25067 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
COL8A2P25067 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
COL8A2P25067 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.92□□□□□ -0.18
COL8A2P25067 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.92□□□□□ -0.18
COL8A2P25067 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
COL8A2P25067 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.92□□□□□ -0.18
COL8A2P25067 SPDYE7P-202ENST00000420373 878 ntBASIC13.92□□□□□ -0.18
COL8A2P25067 AC142381.1-201ENST00000426099 345 ntBASIC13.92□□□□□ -0.18
COL8A2P25067 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 PRYP6-201ENST00000514804 343 ntBASIC13.92□□□□□ -0.18
COL8A2P25067 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.92□□□□□ -0.18
COL8A2P25067 AC105233.2-201ENST00000523697 349 ntBASIC13.92□□□□□ -0.18
COL8A2P25067 AF228730.5-201ENST00000530288 346 ntBASIC13.92□□□□□ -0.18
COL8A2P25067 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.92□□□□□ -0.18
COL8A2P25067 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 AC005498.2-205ENST00000593218 784 ntBASIC13.92□□□□□ -0.18
COL8A2P25067 AC073389.1-201ENST00000595595 795 ntBASIC13.92□□□□□ -0.18
COL8A2P25067 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 AL139011.1-202ENST00000642063 584 ntBASIC13.92□□□□□ -0.18
COL8A2P25067 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms