Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.575e-6■■□□□ 13.3
RPS3P23396 ASH2L-204ENST00000517719 656 ntTSL 318.26■□□□□ 0.515e-6■■□□□ 13.3
RPS3P23396 RBM3-207ENST00000488216 835 ntTSL 314.55□□□□□ -0.082e-7■■□□□ 13.3
RPS3P23396 TRIM28-208ENST00000597172 577 ntTSL 29.29□□□□□ -0.922e-12■■□□□ 13.3
RPS3P23396 NOP9-203ENST00000557362 455 ntTSL 516.89■□□□□ 0.291e-6■■□□□ 13.3
RPS3P23396 PRCP-215ENST00000533126 354 ntTSL 414.91□□□□□ -0.024e-13■■□□□ 13.3
RPS3P23396 PRCP-214ENST00000532809 525 ntTSL 36.26□□□□□ -1.414e-13■■□□□ 13.3
RPS3P23396 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.885e-9■■□□□ 13.3
RPS3P23396 HNRNPK-203ENST00000376256 562 ntTSL 25.38□□□□□ -1.554e-11■■□□□ 13.3
RPS3P23396 SLC16A3-218ENST00000583444 2882 nt18.57■□□□□ 0.562e-46■■□□□ 13.3
RPS3P23396 ANPEP-201ENST00000300060 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.671e-8■■□□□ 13.3
RPS3P23396 SPTAN1-224ENST00000630981 416 ntTSL 215.51■□□□□ 0.075e-11■■□□□ 13.3
RPS3P23396 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.383e-21■■□□□ 13.3
RPS3P23396 RETSAT-204ENST00000438611 1500 ntTSL 511.11□□□□□ -0.635e-11■■□□□ 13.3
RPS3P23396 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.079e-8■■□□□ 13.3
RPS3P23396 ANP32A-202ENST00000409628 2001 ntTSL 515.24■□□□□ 0.039e-8■■□□□ 13.3
RPS3P23396 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.149e-8■■□□□ 13.3
RPS3P23396 GPX1-201ENST00000419349 1106 ntBASIC24.04■■□□□ 1.446e-8■■□□□ 13.3
RPS3P23396 GPX1-203ENST00000496791 580 ntTSL 320.8■□□□□ 0.926e-8■■□□□ 13.3
RPS3P23396 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.866e-8■■□□□ 13.3
RPS3P23396 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.786e-8■■□□□ 13.3
RPS3P23396 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.09■□□□□ 0.333e-9■■□□□ 13.3
RPS3P23396 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.28□□□□□ -0.123e-9■■□□□ 13.3
RPS3P23396 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.193e-9■■□□□ 13.3
RPS3P23396 PSME1-210ENST00000561435 945 ntTSL 2 BASIC10.56□□□□□ -0.723e-9■■□□□ 13.3
RPS3P23396 RACK1-218ENST00000508044 554 ntTSL 510.17□□□□□ -0.781e-48■■□□□ 13.3
RPS3P23396 RACK1-207ENST00000503170 461 ntTSL 415.88■□□□□ 0.137e-19■■□□□ 13.3
RPS3P23396 SEC61A1-203ENST00000464451 1871 ntTSL 2 BASIC11.9□□□□□ -0.53e-9■■□□□ 13.3
RPS3P23396 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.13■□□□□ 0.171e-8■■□□□ 13.3
RPS3P23396 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.191e-8■■□□□ 13.3
RPS3P23396 SLC52A2-210ENST00000532815 513 ntTSL 412.9□□□□□ -0.343e-8■■□□□ 13.3
RPS3P23396 GRB2-210ENST00000582582 584 ntTSL 49.79□□□□□ -0.843e-6■■□□□ 13.2
RPS3P23396 DARS-210ENST00000489964 827 ntTSL 28.79□□□□□ -16e-10■■□□□ 13.2
RPS3P23396 JUP-208ENST00000449889 1069 ntTSL 316.61■□□□□ 0.252e-6■■□□□ 13.2
RPS3P23396 JUP-206ENST00000437187 1029 ntTSL 314.71□□□□□ -0.052e-6■■□□□ 13.2
RPS3P23396 RPL11-202ENST00000443624 994 ntTSL 27.79□□□□□ -1.161e-21■■□□□ 13.2
RPS3P23396 TKT-214ENST00000494523 1955 ntTSL 212.9□□□□□ -0.344e-16■■□□□ 13.2
RPS3P23396 CANX-212ENST00000506654 592 ntTSL 322.24■■□□□ 1.154e-13■■□□□ 13.2
RPS3P23396 FN1-218ENST00000473614 568 ntTSL 27.1□□□□□ -1.271e-58■■□□□ 13.2
RPS3P23396 ACTG1-212ENST00000576209 1698 ntTSL 1 (best)11.9□□□□□ -0.55e-25■■□□□ 13.2
RPS3P23396 HM13-217ENST00000483310 755 ntTSL 311.65□□□□□ -0.547e-11■■□□□ 13.2
RPS3P23396 HM13-209ENST00000464661 906 ntTSL 311.34□□□□□ -0.597e-11■■□□□ 13.2
RPS3P23396 FN1-220ENST00000480024 576 ntTSL 26.39□□□□□ -1.392e-51■■□□□ 13.2
RPS3P23396 ACSM3-213ENST00000568235 558 ntTSL 411.57□□□□□ -0.561e-8■■□□□ 13.2
RPS3P23396 ACSM3-205ENST00000561584 561 ntTSL 411.15□□□□□ -0.621e-8■■□□□ 13.2
RPS3P23396 PKM-223ENST00000569050 457 ntTSL 415.73■□□□□ 0.114e-25■■□□□ 13.2
RPS3P23396 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.316e-12■■□□□ 13.2
RPS3P23396 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.04□□□□□ -1.286e-12■■□□□ 13.2
RPS3P23396 ARF4-204ENST00000486310 1601 ntTSL 36.98□□□□□ -1.296e-12■■□□□ 13.2
RPS3P23396 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.6□□□□□ -1.836e-12■■□□□ 13.2
RPS3P23396 ARF4-203ENST00000483848 404 ntTSL 52.27□□□□□ -2.056e-12■■□□□ 13.2
RPS3P23396 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.261e-323■■□□□ 13.2
RPS3P23396 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.161e-323■■□□□ 13.2
RPS3P23396 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.231e-323■■□□□ 13.2
RPS3P23396 OS9-216ENST00000550793 564 ntTSL 211.7□□□□□ -0.548e-8■■□□□ 13.2
RPS3P23396 TAF15-201ENST00000603067 580 ntTSL 55.26□□□□□ -1.578e-7■■□□□ 13.2
RPS3P23396 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC9.31□□□□□ -0.923e-6■■□□□ 13.2
RPS3P23396 ACTN4-207ENST00000495553 586 ntTSL 59.37□□□□□ -0.917e-9■■□□□ 13.2
RPS3P23396 C2orf82-204ENST00000448993 357 ntAPPRIS ALT2 TSL 512.92□□□□□ -0.342e-6■■□□□ 13.2
RPS3P23396 NDRG1-218ENST00000521438 2810 ntTSL 29.89□□□□□ -0.833e-19■■□□□ 13.2
RPS3P23396 SEC61A1-201ENST00000243253 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.542e-7■■□□□ 13.2
RPS3P23396 NDRG1-216ENST00000521026 2145 ntTSL 213.89□□□□□ -0.192e-17■■□□□ 13.2
RPS3P23396 HM13-220ENST00000492709 1248 ntTSL 514.19□□□□□ -0.144e-11■■□□□ 13.2
RPS3P23396 HM13-212ENST00000469097 801 ntTSL 510.94□□□□□ -0.664e-11■■□□□ 13.2
RPS3P23396 MOGS-208ENST00000486036 811 ntTSL 221.74■■□□□ 1.076e-9■■□□□ 13.2
RPS3P23396 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.698e-7■■□□□ 13.2
RPS3P23396 FKBP2-206ENST00000541388 705 ntTSL 518.14■□□□□ 0.498e-7■■□□□ 13.2
RPS3P23396 TCIRG1-207ENST00000528981 755 ntTSL 516.47■□□□□ 0.237e-8■■□□□ 13.2
RPS3P23396 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.128e-7■■□□□ 13.2
RPS3P23396 TCIRG1-208ENST00000529364 868 ntTSL 315.4■□□□□ 0.067e-8■■□□□ 13.2
RPS3P23396 GAA-203ENST00000570716 534 ntTSL 214.82□□□□□ -0.041e-13■■□□□ 13.2
RPS3P23396 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.288e-7■■□□□ 13.2
RPS3P23396 NDRG1-226ENST00000523642 507 ntTSL 311.92□□□□□ -0.55e-17■■□□□ 13.2
RPS3P23396 SNRNP200-204ENST00000480615 1646 ntTSL 513.2□□□□□ -0.31e-7■■□□□ 13.2
RPS3P23396 FADS1-215ENST00000541683 1844 ntTSL 217.14■□□□□ 0.331e-10■■□□□ 13.2
RPS3P23396 TTYH3-207ENST00000498454 587 ntTSL 220.86■□□□□ 0.931e-14■■□□□ 13.2
RPS3P23396 TTYH3-205ENST00000429448 756 ntTSL 210.23□□□□□ -0.771e-14■■□□□ 13.2
RPS3P23396 CADM1-210ENST00000540951 572 ntTSL 319.15■□□□□ 0.661e-9■■□□□ 13.2
RPS3P23396 YME1L1-204ENST00000396296 986 ntTSL 519.77■□□□□ 0.762e-6■■□□□ 13.2
RPS3P23396 YME1L1-208ENST00000491542 912 ntTSL 214.01□□□□□ -0.172e-6■■□□□ 13.2
RPS3P23396 YME1L1-207ENST00000477432 3474 ntTSL 1 (best) BASIC10.6□□□□□ -0.712e-6■■□□□ 13.2
RPS3P23396 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.13■■■□□ 2.092e-7■■□□□ 13.2
RPS3P23396 SH3GLB2-212ENST00000483980 1015 ntTSL 227.76■■■□□ 2.032e-7■■□□□ 13.2
RPS3P23396 SH3GLB2-208ENST00000455407 837 ntTSL 227.49■■□□□ 1.992e-7■■□□□ 13.2
RPS3P23396 AC093323.1-202ENST00000635031 2045 ntBASIC23.04■■□□□ 1.282e-7■■□□□ 13.2
RPS3P23396 AC093323.1-203ENST00000444232 1605 ntTSL 1 (best)22.72■■□□□ 1.232e-7■■□□□ 13.2
RPS3P23396 ACSS2-216ENST00000484354 517 ntTSL 521.89■■□□□ 1.092e-7■■□□□ 13.2
RPS3P23396 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.39■■□□□ 1.022e-7■■□□□ 13.2
RPS3P23396 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.012e-7■■□□□ 13.2
RPS3P23396 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.95■□□□□ 0.942e-7■■□□□ 13.2
RPS3P23396 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.942e-7■■□□□ 13.2
RPS3P23396 SH3GLB2-204ENST00000416230 720 ntTSL 219.72■□□□□ 0.752e-7■■□□□ 13.2
RPS3P23396 ACSS2-222ENST00000493805 603 ntTSL 419.63■□□□□ 0.732e-7■■□□□ 13.2
RPS3P23396 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.652e-7■■□□□ 13.2
RPS3P23396 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.62e-7■■□□□ 13.2
RPS3P23396 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.86■□□□□ 0.292e-7■■□□□ 13.2
RPS3P23396 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.222e-7■■□□□ 13.2
RPS3P23396 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.79■□□□□ 0.122e-7■■□□□ 13.2
RPS3P23396 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.012e-7■■□□□ 13.2
RPS3P23396 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.92□□□□□ -0.022e-7■■□□□ 13.2
Retrieved 100 of 24,271 protein–RNA pairs in 170.5 ms