Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLTAP09496 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLTAP09496 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLTAP09496 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.07■□□□□ 0.48
CLTAP09496 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CLTAP09496 AC079140.1-201ENST00000508039 487 ntBASIC18.07■□□□□ 0.48
CLTAP09496 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.07■□□□□ 0.48
CLTAP09496 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.07■□□□□ 0.48
CLTAP09496 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.07■□□□□ 0.48
CLTAP09496 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CLTAP09496 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
CLTAP09496 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.07■□□□□ 0.48
CLTAP09496 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.07■□□□□ 0.48
CLTAP09496 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.07■□□□□ 0.48
CLTAP09496 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLTAP09496 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLTAP09496 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
CLTAP09496 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.07■□□□□ 0.48
CLTAP09496 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CLTAP09496 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.07■□□□□ 0.48
CLTAP09496 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CLTAP09496 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.07■□□□□ 0.48
CLTAP09496 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.07■□□□□ 0.48
CLTAP09496 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLTAP09496 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLTAP09496 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CLTAP09496 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CLTAP09496 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLTAP09496 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLTAP09496 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CLTAP09496 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.06■□□□□ 0.48
CLTAP09496 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.06■□□□□ 0.48
CLTAP09496 AL512652.2-201ENST00000625156 1716 ntBASIC18.06■□□□□ 0.48
CLTAP09496 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.06■□□□□ 0.48
CLTAP09496 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CLTAP09496 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CLTAP09496 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.06■□□□□ 0.48
CLTAP09496 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 AC006538.1-201ENST00000567905 1585 ntBASIC18.06■□□□□ 0.48
CLTAP09496 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CLTAP09496 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.06■□□□□ 0.48
CLTAP09496 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.06■□□□□ 0.48
CLTAP09496 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 HLA-J-202ENST00000469281 1241 ntBASIC18.06■□□□□ 0.48
CLTAP09496 AC092183.1-201ENST00000469884 875 ntBASIC18.06■□□□□ 0.48
CLTAP09496 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.06■□□□□ 0.48
CLTAP09496 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.06■□□□□ 0.48
CLTAP09496 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CLTAP09496 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.06■□□□□ 0.48
CLTAP09496 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.06■□□□□ 0.48
CLTAP09496 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.06■□□□□ 0.48
CLTAP09496 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.06■□□□□ 0.48
CLTAP09496 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.06■□□□□ 0.48
CLTAP09496 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.06■□□□□ 0.48
CLTAP09496 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CLTAP09496 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLTAP09496 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLTAP09496 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.05■□□□□ 0.48
CLTAP09496 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLTAP09496 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLTAP09496 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.05■□□□□ 0.48
CLTAP09496 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.05■□□□□ 0.48
CLTAP09496 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CLTAP09496 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CLTAP09496 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.05■□□□□ 0.48
CLTAP09496 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CLTAP09496 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLTAP09496 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLTAP09496 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CLTAP09496 AL592309.1-201ENST00000443127 649 ntBASIC18.05■□□□□ 0.48
CLTAP09496 KRT18P34-201ENST00000488218 1270 ntBASIC18.05■□□□□ 0.48
CLTAP09496 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.05■□□□□ 0.48
CLTAP09496 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLTAP09496 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.05■□□□□ 0.48
CLTAP09496 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.05■□□□□ 0.48
CLTAP09496 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.05■□□□□ 0.48
CLTAP09496 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLTAP09496 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CLTAP09496 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.05■□□□□ 0.48
CLTAP09496 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.05■□□□□ 0.48
CLTAP09496 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLTAP09496 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLTAP09496 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLTAP09496 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms