Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDGFAP04085 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDGFAP04085 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.49■□□□□ 0.07
PDGFAP04085 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.49■□□□□ 0.07
PDGFAP04085 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.49■□□□□ 0.07
PDGFAP04085 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDGFAP04085 AC138028.4-201ENST00000564984 1845 ntBASIC15.49■□□□□ 0.07
PDGFAP04085 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PDGFAP04085 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.49■□□□□ 0.07
PDGFAP04085 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
PDGFAP04085 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.49■□□□□ 0.07
PDGFAP04085 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDGFAP04085 LINC02199-201ENST00000506655 2702 ntBASIC15.49■□□□□ 0.07
PDGFAP04085 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.49■□□□□ 0.07
PDGFAP04085 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDGFAP04085 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PDGFAP04085 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDGFAP04085 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PDGFAP04085 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.48■□□□□ 0.07
PDGFAP04085 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.48■□□□□ 0.07
PDGFAP04085 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PDGFAP04085 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.48■□□□□ 0.07
PDGFAP04085 AP001094.4-201ENST00000579008 2176 ntBASIC15.48■□□□□ 0.07
PDGFAP04085 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PDGFAP04085 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PDGFAP04085 AL512638.1-201ENST00000457493 794 ntBASIC15.48■□□□□ 0.07
PDGFAP04085 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.48■□□□□ 0.07
PDGFAP04085 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.48■□□□□ 0.07
PDGFAP04085 AC069120.2-201ENST00000524091 540 ntBASIC15.48■□□□□ 0.07
PDGFAP04085 AC109635.5-201ENST00000533593 962 ntBASIC15.48■□□□□ 0.07
PDGFAP04085 ALG1L8P-201ENST00000533887 760 ntBASIC15.48■□□□□ 0.07
PDGFAP04085 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.48■□□□□ 0.07
PDGFAP04085 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.48■□□□□ 0.07
PDGFAP04085 LINC01451-201ENST00000623792 534 ntBASIC15.48■□□□□ 0.07
PDGFAP04085 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
PDGFAP04085 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.48■□□□□ 0.07
PDGFAP04085 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.48■□□□□ 0.07
PDGFAP04085 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.48■□□□□ 0.07
PDGFAP04085 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PDGFAP04085 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.48■□□□□ 0.07
PDGFAP04085 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.48■□□□□ 0.07
PDGFAP04085 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDGFAP04085 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
PDGFAP04085 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.47■□□□□ 0.07
PDGFAP04085 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.47■□□□□ 0.07
PDGFAP04085 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.47■□□□□ 0.07
PDGFAP04085 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.47■□□□□ 0.07
PDGFAP04085 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.47■□□□□ 0.07
PDGFAP04085 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PDGFAP04085 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.47■□□□□ 0.07
PDGFAP04085 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PDGFAP04085 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.47■□□□□ 0.07
PDGFAP04085 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.47■□□□□ 0.07
PDGFAP04085 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.47■□□□□ 0.07
PDGFAP04085 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.47■□□□□ 0.07
PDGFAP04085 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.47■□□□□ 0.07
PDGFAP04085 SERBP1P5-201ENST00000510079 1181 ntBASIC15.47■□□□□ 0.07
PDGFAP04085 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.47■□□□□ 0.07
PDGFAP04085 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.47■□□□□ 0.07
PDGFAP04085 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PDGFAP04085 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
PDGFAP04085 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms