Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
APOA1P02647 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
APOA1P02647 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.78□□□□□ -0.04
APOA1P02647 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOA1P02647 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOA1P02647 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOA1P02647 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.77□□□□□ -0.04
APOA1P02647 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOA1P02647 AC010460.3-201ENST00000511359 1579 ntBASIC14.77□□□□□ -0.04
APOA1P02647 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOA1P02647 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOA1P02647 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOA1P02647 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
APOA1P02647 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.77□□□□□ -0.04
APOA1P02647 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOA1P02647 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOA1P02647 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOA1P02647 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOA1P02647 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOA1P02647 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOA1P02647 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOA1P02647 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOA1P02647 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.77□□□□□ -0.04
APOA1P02647 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOA1P02647 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
APOA1P02647 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 UNC93B2-201ENST00000285383 730 ntBASIC14.77□□□□□ -0.05
APOA1P02647 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.77□□□□□ -0.05
APOA1P02647 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
APOA1P02647 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.77□□□□□ -0.05
APOA1P02647 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.77□□□□□ -0.05
APOA1P02647 C2orf69P3-201ENST00000565542 1120 ntBASIC14.77□□□□□ -0.05
APOA1P02647 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.77□□□□□ -0.05
APOA1P02647 AC109462.3-201ENST00000573934 613 ntBASIC14.77□□□□□ -0.05
APOA1P02647 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.77□□□□□ -0.05
APOA1P02647 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 AL731571.1-201ENST00000617058 5428 ntBASIC14.77□□□□□ -0.05
APOA1P02647 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.77□□□□□ -0.05
APOA1P02647 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.77□□□□□ -0.05
APOA1P02647 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 PRAL-201ENST00000624952 3286 ntBASIC14.77□□□□□ -0.05
APOA1P02647 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
APOA1P02647 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.77□□□□□ -0.05
APOA1P02647 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.77□□□□□ -0.05
APOA1P02647 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOA1P02647 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
APOA1P02647 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOA1P02647 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.76□□□□□ -0.05
APOA1P02647 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.76□□□□□ -0.05
APOA1P02647 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
APOA1P02647 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOA1P02647 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.76□□□□□ -0.05
APOA1P02647 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
APOA1P02647 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOA1P02647 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
APOA1P02647 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
APOA1P02647 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.76□□□□□ -0.05
APOA1P02647 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOA1P02647 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOA1P02647 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOA1P02647 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.76□□□□□ -0.05
APOA1P02647 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOA1P02647 AC107956.1-201ENST00000494359 873 ntBASIC14.76□□□□□ -0.05
APOA1P02647 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.76□□□□□ -0.05
APOA1P02647 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.76□□□□□ -0.05
APOA1P02647 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.76□□□□□ -0.05
APOA1P02647 AC026471.5-201ENST00000615068 467 ntBASIC14.76□□□□□ -0.05
APOA1P02647 AC113410.3-201ENST00000623366 203 ntBASIC14.76□□□□□ -0.05
APOA1P02647 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOA1P02647 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOA1P02647 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOA1P02647 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOA1P02647 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
APOA1P02647 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
APOA1P02647 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
APOA1P02647 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOA1P02647 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOA1P02647 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
APOA1P02647 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOA1P02647 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOA1P02647 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.76□□□□□ -0.05
APOA1P02647 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.76□□□□□ -0.05
APOA1P02647 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms