Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SGCEO43556 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.67□□□□□ -0.06
SGCEO43556 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SGCEO43556 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SGCEO43556 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SGCEO43556 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SGCEO43556 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SGCEO43556 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SGCEO43556 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.67□□□□□ -0.06
SGCEO43556 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.67□□□□□ -0.06
SGCEO43556 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.67□□□□□ -0.06
SGCEO43556 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SGCEO43556 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.67□□□□□ -0.06
SGCEO43556 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SGCEO43556 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.67□□□□□ -0.06
SGCEO43556 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
SGCEO43556 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.67□□□□□ -0.06
SGCEO43556 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.67□□□□□ -0.06
SGCEO43556 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SGCEO43556 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SGCEO43556 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.67□□□□□ -0.06
SGCEO43556 LINC02199-201ENST00000506655 2702 ntBASIC14.67□□□□□ -0.06
SGCEO43556 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SGCEO43556 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SGCEO43556 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SGCEO43556 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SGCEO43556 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SGCEO43556 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SGCEO43556 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SGCEO43556 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SGCEO43556 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SGCEO43556 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.67□□□□□ -0.06
SGCEO43556 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SGCEO43556 HLA-A-201ENST00000376802 1334 ntBASIC14.66□□□□□ -0.06
SGCEO43556 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.66□□□□□ -0.06
SGCEO43556 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.66□□□□□ -0.06
SGCEO43556 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SGCEO43556 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SGCEO43556 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.66□□□□□ -0.06
SGCEO43556 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SGCEO43556 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SGCEO43556 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SGCEO43556 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.66□□□□□ -0.06
SGCEO43556 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.66□□□□□ -0.06
SGCEO43556 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SGCEO43556 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SGCEO43556 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SGCEO43556 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.66□□□□□ -0.06
SGCEO43556 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.66□□□□□ -0.06
SGCEO43556 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.66□□□□□ -0.06
SGCEO43556 UNC93B6-202ENST00000528242 690 ntBASIC14.66□□□□□ -0.06
SGCEO43556 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
SGCEO43556 OR7E47P-204ENST00000575924 449 ntBASIC14.66□□□□□ -0.06
SGCEO43556 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.66□□□□□ -0.06
SGCEO43556 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SGCEO43556 CYP2A7P1-201ENST00000595391 815 ntBASIC14.66□□□□□ -0.06
SGCEO43556 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SGCEO43556 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SGCEO43556 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.66□□□□□ -0.06
SGCEO43556 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SGCEO43556 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
SGCEO43556 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SGCEO43556 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SGCEO43556 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SGCEO43556 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.66□□□□□ -0.06
SGCEO43556 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SGCEO43556 LINC02228-204ENST00000642115 2962 ntBASIC14.66□□□□□ -0.06
SGCEO43556 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.66□□□□□ -0.06
SGCEO43556 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SGCEO43556 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SGCEO43556 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SGCEO43556 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.65□□□□□ -0.06
SGCEO43556 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SGCEO43556 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SGCEO43556 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SGCEO43556 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.65□□□□□ -0.06
SGCEO43556 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SGCEO43556 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SGCEO43556 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.65□□□□□ -0.06
SGCEO43556 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.65□□□□□ -0.06
SGCEO43556 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SGCEO43556 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.65□□□□□ -0.06
SGCEO43556 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SGCEO43556 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SGCEO43556 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SGCEO43556 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SGCEO43556 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.65□□□□□ -0.06
SGCEO43556 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
SGCEO43556 CRYGEP-201ENST00000412192 528 ntBASIC14.65□□□□□ -0.06
SGCEO43556 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.65□□□□□ -0.06
SGCEO43556 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.65□□□□□ -0.06
SGCEO43556 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.65□□□□□ -0.06
SGCEO43556 AC009947.1-201ENST00000444350 727 ntBASIC14.65□□□□□ -0.06
SGCEO43556 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SGCEO43556 RNA5SP415-201ENST00000517246 115 ntBASIC14.65□□□□□ -0.06
SGCEO43556 IGHV3-22-201ENST00000520721 359 ntBASIC14.65□□□□□ -0.06
SGCEO43556 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.65□□□□□ -0.06
SGCEO43556 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SGCEO43556 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SGCEO43556 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms