Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 AL513480.1-201ENST00000451731 511 ntBASIC14.39□□□□□ -0.11
XRCC2O43543 POU5F1P6-201ENST00000466990 990 ntBASIC14.39□□□□□ -0.11
XRCC2O43543 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.39□□□□□ -0.11
XRCC2O43543 RNA5SP419-201ENST00000515908 135 ntBASIC14.39□□□□□ -0.11
XRCC2O43543 IGHV3-22-201ENST00000520721 359 ntBASIC14.39□□□□□ -0.11
XRCC2O43543 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.39□□□□□ -0.11
XRCC2O43543 AL031432.2-201ENST00000566714 459 ntBASIC14.39□□□□□ -0.11
XRCC2O43543 AL928711.1-201ENST00000570165 459 ntBASIC14.39□□□□□ -0.11
XRCC2O43543 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XRCC2O43543 MIR3909-201ENST00000579518 119 ntBASIC14.39□□□□□ -0.11
XRCC2O43543 AC021097.1-201ENST00000607902 574 ntBASIC14.39□□□□□ -0.11
XRCC2O43543 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
XRCC2O43543 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
XRCC2O43543 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
XRCC2O43543 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.39□□□□□ -0.11
XRCC2O43543 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
XRCC2O43543 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.39□□□□□ -0.11
XRCC2O43543 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
XRCC2O43543 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.39□□□□□ -0.11
XRCC2O43543 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
XRCC2O43543 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XRCC2O43543 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
XRCC2O43543 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.39□□□□□ -0.11
XRCC2O43543 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.39□□□□□ -0.11
XRCC2O43543 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.39□□□□□ -0.11
XRCC2O43543 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XRCC2O43543 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.39□□□□□ -0.11
XRCC2O43543 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
XRCC2O43543 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XRCC2O43543 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.39□□□□□ -0.11
XRCC2O43543 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
XRCC2O43543 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.38□□□□□ -0.11
XRCC2O43543 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.38□□□□□ -0.11
XRCC2O43543 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.38□□□□□ -0.11
XRCC2O43543 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.38□□□□□ -0.11
XRCC2O43543 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
XRCC2O43543 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.38□□□□□ -0.11
XRCC2O43543 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
XRCC2O43543 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.38□□□□□ -0.11
XRCC2O43543 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
XRCC2O43543 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
XRCC2O43543 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.38□□□□□ -0.11
XRCC2O43543 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
XRCC2O43543 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
XRCC2O43543 RNA5SP415-201ENST00000517246 115 ntBASIC14.38□□□□□ -0.11
XRCC2O43543 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
XRCC2O43543 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.38□□□□□ -0.11
XRCC2O43543 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
XRCC2O43543 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.38□□□□□ -0.11
XRCC2O43543 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.38□□□□□ -0.11
XRCC2O43543 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
XRCC2O43543 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
XRCC2O43543 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
XRCC2O43543 MTHFR-217ENST00000641820 1569 ntBASIC14.38□□□□□ -0.11
XRCC2O43543 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.38□□□□□ -0.11
XRCC2O43543 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.38□□□□□ -0.11
XRCC2O43543 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
XRCC2O43543 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.38□□□□□ -0.11
XRCC2O43543 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.38□□□□□ -0.11
XRCC2O43543 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XRCC2O43543 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.38□□□□□ -0.11
XRCC2O43543 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.37□□□□□ -0.11
XRCC2O43543 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
XRCC2O43543 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.37□□□□□ -0.11
XRCC2O43543 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 AC068418.2-201ENST00000577309 3703 ntBASIC14.37□□□□□ -0.11
XRCC2O43543 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
XRCC2O43543 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.37□□□□□ -0.11
XRCC2O43543 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
XRCC2O43543 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
XRCC2O43543 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.37□□□□□ -0.11
XRCC2O43543 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms