Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 AC003669.1-201ENST00000334569 611 ntBASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 KLF4P1-201ENST00000412782 1185 ntBASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 HOMER2P1-201ENST00000455653 964 ntBASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SND1-IT1Q9HBX3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 AC006058.4-201ENST00000624016 1670 ntBASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms