Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 AC092384.3-202ENST00000564646 2873 ntBASIC17.58■□□□□ 0.41
PACSIN1Q9BY11 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PACSIN1Q9BY11 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.58■□□□□ 0.41
PACSIN1Q9BY11 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PACSIN1Q9BY11 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PACSIN1Q9BY11 AC144831.1-201ENST00000573312 2656 ntBASIC17.58■□□□□ 0.41
PACSIN1Q9BY11 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PACSIN1Q9BY11 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.58■□□□□ 0.41
PACSIN1Q9BY11 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
PACSIN1Q9BY11 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PACSIN1Q9BY11 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.58■□□□□ 0.41
PACSIN1Q9BY11 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 ACTL9-202ENST00000612068 1252 ntBASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 AC148477.8-201ENST00000624298 468 ntBASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PACSIN1Q9BY11 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 AP005117.1-202ENST00000581724 1908 ntBASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 AC018712.1-201ENST00000455767 687 ntBASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 EMBP1-201ENST00000458200 901 ntBASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 AC108073.2-201ENST00000464002 357 ntBASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 AC004790.2-201ENST00000623588 572 ntBASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PACSIN1Q9BY11 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 AC105339.3-201ENST00000560043 636 ntBASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PACSIN1Q9BY11 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms