Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
COPS6Q7L5N1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 AC106886.4-201ENST00000623557 2502 ntBASIC20.7■□□□□ 0.9
COPS6Q7L5N1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 AC004840.1-201ENST00000636359 365 ntBASIC20.7■□□□□ 0.9
COPS6Q7L5N1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COPS6Q7L5N1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 CRB3P1-201ENST00000449338 276 ntBASIC20.69■□□□□ 0.9
COPS6Q7L5N1 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 AL512361.1-201ENST00000554200 418 ntBASIC20.69■□□□□ 0.9
COPS6Q7L5N1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 AC138932.1-201ENST00000534164 6830 ntBASIC20.69■□□□□ 0.9
COPS6Q7L5N1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPS6Q7L5N1 U82695.1-201ENST00000635752 1889 ntBASIC20.69■□□□□ 0.9
COPS6Q7L5N1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
COPS6Q7L5N1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms