Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 AC006504.4-201ENST00000592118 1568 ntBASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 LAGE3P1-201ENST00000425356 484 ntBASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 PMS2P1-201ENST00000431037 1228 ntBASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 HCG4P8-203ENST00000443049 980 ntBASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 AC087641.1-201ENST00000557561 1021 ntBASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 AC091304.2-201ENST00000564639 760 ntBASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 AL603832.2-201ENST00000566195 2125 ntBASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.02■□□□□ 0.16
ATP6AP1LQ52LC2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP6AP1LQ52LC2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.02■□□□□ 0.15
ATP6AP1LQ52LC2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATP6AP1LQ52LC2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.02■□□□□ 0.15
ATP6AP1LQ52LC2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
ATP6AP1LQ52LC2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP6AP1LQ52LC2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATP6AP1LQ52LC2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.02■□□□□ 0.15
ATP6AP1LQ52LC2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP6AP1LQ52LC2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.02■□□□□ 0.15
ATP6AP1LQ52LC2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 UPK3BP1-201ENST00000428678 509 ntBASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 AC025062.2-201ENST00000605477 670 ntBASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 REXO1L6P-202ENST00000619970 1078 ntBASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6AP1LQ52LC2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP6AP1LQ52LC2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP6AP1LQ52LC2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16■□□□□ 0.15
ATP6AP1LQ52LC2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP6AP1LQ52LC2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP6AP1LQ52LC2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16■□□□□ 0.15
ATP6AP1LQ52LC2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
ATP6AP1LQ52LC2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP6AP1LQ52LC2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms