Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SEC61A1P61619 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SEC61A1P61619 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SEC61A1P61619 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.55□□□□□ -0.08
SEC61A1P61619 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.55□□□□□ -0.08
SEC61A1P61619 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.55□□□□□ -0.08
SEC61A1P61619 AC092910.1-201ENST00000482027 1129 ntBASIC14.55□□□□□ -0.08
SEC61A1P61619 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.55□□□□□ -0.08
SEC61A1P61619 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.55□□□□□ -0.08
SEC61A1P61619 IGHV3-52-201ENST00000519770 353 ntBASIC14.55□□□□□ -0.08
SEC61A1P61619 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.55□□□□□ -0.08
SEC61A1P61619 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.55□□□□□ -0.08
SEC61A1P61619 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.55□□□□□ -0.08
SEC61A1P61619 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.55□□□□□ -0.08
SEC61A1P61619 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.55□□□□□ -0.08
SEC61A1P61619 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.55□□□□□ -0.08
SEC61A1P61619 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.55□□□□□ -0.08
SEC61A1P61619 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.55□□□□□ -0.08
SEC61A1P61619 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SEC61A1P61619 AL022326.1-202ENST00000641533 845 ntBASIC14.55□□□□□ -0.08
SEC61A1P61619 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SEC61A1P61619 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.55□□□□□ -0.08
SEC61A1P61619 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 SIGLEC16-201ENST00000599858 1437 ntBASIC14.55□□□□□ -0.08
SEC61A1P61619 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SEC61A1P61619 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.55□□□□□ -0.08
SEC61A1P61619 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
SEC61A1P61619 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SEC61A1P61619 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.55□□□□□ -0.08
SEC61A1P61619 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SEC61A1P61619 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
SEC61A1P61619 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SEC61A1P61619 AC092364.2-201ENST00000596710 2692 ntBASIC14.54□□□□□ -0.08
SEC61A1P61619 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SEC61A1P61619 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.54□□□□□ -0.08
SEC61A1P61619 RPS2P28-201ENST00000314255 741 ntBASIC14.54□□□□□ -0.08
SEC61A1P61619 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
SEC61A1P61619 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 AL020989.1-201ENST00000422979 469 ntBASIC14.54□□□□□ -0.08
SEC61A1P61619 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.54□□□□□ -0.08
SEC61A1P61619 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.54□□□□□ -0.08
SEC61A1P61619 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.54□□□□□ -0.08
SEC61A1P61619 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.54□□□□□ -0.08
SEC61A1P61619 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.54□□□□□ -0.08
SEC61A1P61619 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.54□□□□□ -0.08
SEC61A1P61619 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.54□□□□□ -0.08
SEC61A1P61619 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.54□□□□□ -0.08
SEC61A1P61619 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.54□□□□□ -0.08
SEC61A1P61619 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 AC107918.4-202ENST00000641623 219 ntBASIC14.54□□□□□ -0.08
SEC61A1P61619 AP002414.3-201ENST00000589352 1468 ntBASIC14.54□□□□□ -0.08
SEC61A1P61619 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SEC61A1P61619 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.54□□□□□ -0.08
SEC61A1P61619 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.54□□□□□ -0.08
SEC61A1P61619 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61A1P61619 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SEC61A1P61619 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SEC61A1P61619 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.53□□□□□ -0.08
SEC61A1P61619 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SEC61A1P61619 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SEC61A1P61619 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SEC61A1P61619 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms