Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
XPAP23025 AL627223.1-201ENST00000416693 442 ntBASIC16.67■□□□□ 0.26
XPAP23025 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.67■□□□□ 0.26
XPAP23025 TSEN15P1-201ENST00000423257 515 ntBASIC16.67■□□□□ 0.26
XPAP23025 KRT8P23-201ENST00000560090 1207 ntBASIC16.67■□□□□ 0.26
XPAP23025 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
XPAP23025 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.67■□□□□ 0.26
XPAP23025 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.67■□□□□ 0.26
XPAP23025 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.67■□□□□ 0.26
XPAP23025 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XPAP23025 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
XPAP23025 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.67■□□□□ 0.26
XPAP23025 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
XPAP23025 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
XPAP23025 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
XPAP23025 AL603756.1-201ENST00000606511 2163 ntBASIC16.67■□□□□ 0.26
XPAP23025 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XPAP23025 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XPAP23025 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
XPAP23025 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XPAP23025 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
XPAP23025 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
XPAP23025 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.66■□□□□ 0.26
XPAP23025 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
XPAP23025 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
XPAP23025 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
XPAP23025 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XPAP23025 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.66■□□□□ 0.26
XPAP23025 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XPAP23025 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.66■□□□□ 0.26
XPAP23025 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XPAP23025 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.66■□□□□ 0.26
XPAP23025 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
XPAP23025 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XPAP23025 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.66■□□□□ 0.26
XPAP23025 SPCS2P4-201ENST00000436160 681 ntBASIC16.66■□□□□ 0.26
XPAP23025 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.66■□□□□ 0.26
XPAP23025 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.66■□□□□ 0.26
XPAP23025 AC027307.2-201ENST00000591252 911 ntBASIC16.66■□□□□ 0.26
XPAP23025 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.66■□□□□ 0.26
XPAP23025 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
XPAP23025 AC008267.7-201ENST00000624570 1194 ntBASIC16.66■□□□□ 0.26
XPAP23025 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.66■□□□□ 0.26
XPAP23025 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
XPAP23025 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.66■□□□□ 0.26
XPAP23025 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XPAP23025 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
XPAP23025 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
XPAP23025 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
XPAP23025 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
XPAP23025 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.66■□□□□ 0.26
XPAP23025 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.66■□□□□ 0.26
XPAP23025 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XPAP23025 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
XPAP23025 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.65■□□□□ 0.26
XPAP23025 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
XPAP23025 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
XPAP23025 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
XPAP23025 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
XPAP23025 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.65■□□□□ 0.26
XPAP23025 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
XPAP23025 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
XPAP23025 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
XPAP23025 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
XPAP23025 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.65■□□□□ 0.26
XPAP23025 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
XPAP23025 SNX33P1-201ENST00000592116 1762 ntBASIC16.65■□□□□ 0.26
XPAP23025 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.65■□□□□ 0.26
XPAP23025 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
XPAP23025 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
XPAP23025 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
XPAP23025 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.65■□□□□ 0.26
XPAP23025 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.65■□□□□ 0.26
XPAP23025 PMS2P2-201ENST00000425039 1128 ntBASIC16.65■□□□□ 0.26
XPAP23025 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.65■□□□□ 0.26
XPAP23025 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.65■□□□□ 0.26
XPAP23025 HLA-J-202ENST00000469281 1241 ntBASIC16.65■□□□□ 0.26
XPAP23025 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.65■□□□□ 0.26
XPAP23025 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.65■□□□□ 0.26
XPAP23025 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.65■□□□□ 0.26
XPAP23025 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
XPAP23025 AC027612.4-201ENST00000605371 583 ntBASIC16.65■□□□□ 0.26
XPAP23025 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.65■□□□□ 0.26
XPAP23025 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
XPAP23025 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.65■□□□□ 0.26
XPAP23025 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
XPAP23025 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.65■□□□□ 0.26
XPAP23025 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
XPAP23025 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
XPAP23025 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
XPAP23025 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
XPAP23025 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.65■□□□□ 0.26
XPAP23025 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
XPAP23025 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.26
XPAP23025 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.64■□□□□ 0.25
XPAP23025 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XPAP23025 AC006538.1-201ENST00000567905 1585 ntBASIC16.64■□□□□ 0.25
XPAP23025 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
XPAP23025 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.64■□□□□ 0.25
XPAP23025 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms