Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 AC007326.2-201ENST00000624224 7579 ntBASIC16.68■□□□□ 0.26
HLA-DPA1P20036 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 AC005052.1-201ENST00000625181 2492 ntBASIC16.68■□□□□ 0.26
HLA-DPA1P20036 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 AC092919.2-201ENST00000623631 1645 ntBASIC16.67■□□□□ 0.26
HLA-DPA1P20036 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 POLD2P1-201ENST00000511220 997 ntBASIC16.67■□□□□ 0.26
HLA-DPA1P20036 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 AC112191.1-201ENST00000523689 701 ntBASIC16.67■□□□□ 0.26
HLA-DPA1P20036 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 AP002472.1-201ENST00000577490 586 ntBASIC16.67■□□□□ 0.26
HLA-DPA1P20036 AL671883.3-201ENST00000603274 991 ntBASIC16.67■□□□□ 0.26
HLA-DPA1P20036 AL161645.1-201ENST00000622716 1255 ntBASIC16.67■□□□□ 0.26
HLA-DPA1P20036 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DPA1P20036 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 CYP2T1P-202ENST00000641596 2535 ntBASIC16.66■□□□□ 0.26
HLA-DPA1P20036 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 KRT18P34-201ENST00000488218 1270 ntBASIC16.66■□□□□ 0.26
HLA-DPA1P20036 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 AL078644.1-201ENST00000609881 752 ntBASIC16.66■□□□□ 0.26
HLA-DPA1P20036 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HLA-DPA1P20036 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms