Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TCRBV4S1A1TA0A5B7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TCRBV4S1A1TA0A5B7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TCRBV4S1A1TA0A5B7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
TCRBV4S1A1TA0A5B7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TCRBV4S1A1TA0A5B7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 DNAJB3-202ENST00000449667 1266 ntBASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CEND1P1-201ENST00000451006 455 ntBASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AC074386.1-202ENST00000463561 864 ntBASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PDPK2P-202ENST00000562415 1191 ntBASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PKD1P5-201ENST00000532415 10291 ntBASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRBV4S1A1TA0A5B7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 MKNK2P1-201ENST00000437526 628 ntBASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 RHOQP3-201ENST00000437982 621 ntBASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AL513480.1-201ENST00000451731 511 ntBASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ALG1L5P-201ENST00000482043 771 ntBASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 OR7E47P-204ENST00000575924 449 ntBASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AL021920.2-201ENST00000624828 1351 ntBASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms