Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM62Q9BVG3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM62Q9BVG3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM62Q9BVG3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
TRIM62Q9BVG3 AC011676.5-201ENST00000624864 2660 ntBASIC17.21■□□□□ 0.35
TRIM62Q9BVG3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM62Q9BVG3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM62Q9BVG3 ME2P1-201ENST00000426028 1970 ntBASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 AC004461.1-201ENST00000412461 403 ntBASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM62Q9BVG3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 MIR346-201ENST00000362234 95 ntBASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 AL627223.1-201ENST00000416693 442 ntBASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 DNAJB3-202ENST00000449667 1266 ntBASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 AC098859.1-201ENST00000502915 1238 ntBASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 LINC01225-203ENST00000563550 1244 ntBASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 AP000842.3-202ENST00000569238 1080 ntBASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TRIM62Q9BVG3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM62Q9BVG3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM62Q9BVG3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM62Q9BVG3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TRIM62Q9BVG3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM62Q9BVG3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM62Q9BVG3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM62Q9BVG3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM62Q9BVG3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM62Q9BVG3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
TRIM62Q9BVG3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM62Q9BVG3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRIM62Q9BVG3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms