Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 AC068587.6-202ENST00000641839 5619 ntBASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 AC087163.2-201ENST00000457299 853 ntBASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 AC106795.1-205ENST00000512851 1056 ntBASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 AC139887.3-201ENST00000568585 713 ntBASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 AC005412.3-201ENST00000580309 715 ntBASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 CYP2A7P1-201ENST00000595391 815 ntBASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 AP005117.1-202ENST00000581724 1908 ntBASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01561Q8N1V8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
LINC01561Q8N1V8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01561Q8N1V8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
LINC01561Q8N1V8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01561Q8N1V8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01561Q8N1V8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01561Q8N1V8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01561Q8N1V8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01561Q8N1V8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 AC063926.3-201ENST00000624734 5658 ntBASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 HLA-DQB2-231ENST00000435145 2026 ntBASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms