Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PHC1P78364 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.82■□□□□ 0.12
PHC1P78364 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PHC1P78364 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PHC1P78364 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHC1P78364 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHC1P78364 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHC1P78364 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHC1P78364 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHC1P78364 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHC1P78364 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHC1P78364 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHC1P78364 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.81■□□□□ 0.12
PHC1P78364 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PHC1P78364 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHC1P78364 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
PHC1P78364 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHC1P78364 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHC1P78364 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHC1P78364 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHC1P78364 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PHC1P78364 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHC1P78364 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.81■□□□□ 0.12
PHC1P78364 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PHC1P78364 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.81■□□□□ 0.12
PHC1P78364 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHC1P78364 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHC1P78364 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PHC1P78364 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHC1P78364 KRT18P27-201ENST00000427733 1299 ntBASIC15.81■□□□□ 0.12
PHC1P78364 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
PHC1P78364 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.81■□□□□ 0.12
PHC1P78364 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.81■□□□□ 0.12
PHC1P78364 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.81■□□□□ 0.12
PHC1P78364 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PHC1P78364 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.81■□□□□ 0.12
PHC1P78364 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PHC1P78364 GPAA1P2-202ENST00000606848 1787 ntBASIC15.81■□□□□ 0.12
PHC1P78364 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
PHC1P78364 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.81■□□□□ 0.12
PHC1P78364 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHC1P78364 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PHC1P78364 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHC1P78364 AC006449.6-201ENST00000612330 2296 ntBASIC15.8■□□□□ 0.12
PHC1P78364 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.8■□□□□ 0.12
PHC1P78364 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PHC1P78364 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.8■□□□□ 0.12
PHC1P78364 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.8■□□□□ 0.12
PHC1P78364 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.8■□□□□ 0.12
PHC1P78364 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.8■□□□□ 0.12
PHC1P78364 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PHC1P78364 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.8■□□□□ 0.12
PHC1P78364 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PHC1P78364 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PHC1P78364 AC073621.1-201ENST00000392730 636 ntBASIC15.8■□□□□ 0.12
PHC1P78364 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.8■□□□□ 0.12
PHC1P78364 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.8■□□□□ 0.12
PHC1P78364 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.8■□□□□ 0.12
PHC1P78364 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.8■□□□□ 0.12
PHC1P78364 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.8■□□□□ 0.12
PHC1P78364 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.8■□□□□ 0.12
PHC1P78364 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
PHC1P78364 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.8■□□□□ 0.12
PHC1P78364 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.8■□□□□ 0.12
PHC1P78364 AC107918.4-202ENST00000641623 219 ntBASIC15.8■□□□□ 0.12
PHC1P78364 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PHC1P78364 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PHC1P78364 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.8■□□□□ 0.12
PHC1P78364 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PHC1P78364 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.8■□□□□ 0.12
PHC1P78364 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.8■□□□□ 0.12
PHC1P78364 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHC1P78364 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PHC1P78364 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.79■□□□□ 0.12
PHC1P78364 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.79■□□□□ 0.12
PHC1P78364 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHC1P78364 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PHC1P78364 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHC1P78364 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.79■□□□□ 0.12
PHC1P78364 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.79■□□□□ 0.12
PHC1P78364 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
PHC1P78364 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms