Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC107890.1-201ENST00000422478 521 ntBASIC18.23■□□□□ 0.51
GPC3P51654 FAM8A3P-201ENST00000427218 844 ntBASIC18.23■□□□□ 0.51
GPC3P51654 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC3P51654 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.23■□□□□ 0.51
GPC3P51654 PRYP6-201ENST00000514804 343 ntBASIC18.23■□□□□ 0.51
GPC3P51654 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.23■□□□□ 0.51
GPC3P51654 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC3P51654 MIR3197-201ENST00000582241 73 ntBASIC18.23■□□□□ 0.51
GPC3P51654 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.23■□□□□ 0.51
GPC3P51654 AL096865.1-201ENST00000606796 927 ntBASIC18.23■□□□□ 0.51
GPC3P51654 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GPC3P51654 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
GPC3P51654 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
GPC3P51654 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC3P51654 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
GPC3P51654 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
GPC3P51654 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
GPC3P51654 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GPC3P51654 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
GPC3P51654 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC3P51654 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.23■□□□□ 0.51
GPC3P51654 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.23■□□□□ 0.51
GPC3P51654 AL603756.1-201ENST00000606511 2163 ntBASIC18.23■□□□□ 0.51
GPC3P51654 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC3P51654 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC3P51654 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC3P51654 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC3P51654 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
GPC3P51654 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
GPC3P51654 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC3P51654 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.22■□□□□ 0.51
GPC3P51654 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.22■□□□□ 0.51
GPC3P51654 AC055876.3-201ENST00000431496 288 ntBASIC18.22■□□□□ 0.51
GPC3P51654 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.22■□□□□ 0.51
GPC3P51654 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.22■□□□□ 0.51
GPC3P51654 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.22■□□□□ 0.51
GPC3P51654 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.22■□□□□ 0.51
GPC3P51654 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.22■□□□□ 0.51
GPC3P51654 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.22■□□□□ 0.51
GPC3P51654 AC138649.4-201ENST00000612222 287 ntBASIC18.22■□□□□ 0.51
GPC3P51654 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.22■□□□□ 0.51
GPC3P51654 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC3P51654 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC3P51654 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC3P51654 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC3P51654 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.22■□□□□ 0.51
GPC3P51654 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC3P51654 AC073439.1-201ENST00000624121 1774 ntBASIC18.22■□□□□ 0.51
GPC3P51654 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GPC3P51654 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GPC3P51654 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC3P51654 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC3P51654 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
GPC3P51654 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GPC3P51654 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.21■□□□□ 0.51
GPC3P51654 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GPC3P51654 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GPC3P51654 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
GPC3P51654 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GPC3P51654 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.21■□□□□ 0.51
GPC3P51654 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
GPC3P51654 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GPC3P51654 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
GPC3P51654 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.21■□□□□ 0.51
GPC3P51654 MIR943-201ENST00000401286 94 ntBASIC18.21■□□□□ 0.51
GPC3P51654 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
GPC3P51654 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
GPC3P51654 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
GPC3P51654 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.21■□□□□ 0.51
GPC3P51654 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.21■□□□□ 0.51
GPC3P51654 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.21■□□□□ 0.51
GPC3P51654 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.21■□□□□ 0.51
GPC3P51654 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.21■□□□□ 0.51
GPC3P51654 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.21■□□□□ 0.51
GPC3P51654 AC140878.1-201ENST00000565277 250 ntBASIC18.21■□□□□ 0.51
GPC3P51654 AC092364.2-202ENST00000597012 1073 ntBASIC18.21■□□□□ 0.51
GPC3P51654 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.21■□□□□ 0.51
GPC3P51654 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.21■□□□□ 0.51
GPC3P51654 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
GPC3P51654 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GPC3P51654 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GPC3P51654 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
GPC3P51654 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
GPC3P51654 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.21■□□□□ 0.51
GPC3P51654 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GPC3P51654 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.21■□□□□ 0.51
GPC3P51654 AP3S2-216ENST00000617003 1561 ntBASIC18.21■□□□□ 0.51
GPC3P51654 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.5
GPC3P51654 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.21■□□□□ 0.5
GPC3P51654 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
GPC3P51654 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC3P51654 AC084018.2-201ENST00000613093 2607 ntBASIC18.2■□□□□ 0.5
GPC3P51654 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC3P51654 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
GPC3P51654 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC3P51654 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.2■□□□□ 0.5
GPC3P51654 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC3P51654 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC3P51654 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.2■□□□□ 0.5
GPC3P51654 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms